RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PCYOX1Q9UHG3 505 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 ITGB1BP2Q9UKP3 347 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 DRG1Q9Y295 367 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PCDHGB6Q9Y5F9 930 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 GPR45Q9Y5Y3 372 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 PRRC2CQ9Y520 2896 aaKnown RBP5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
CSDE1-207ENST00000483407 CRYBG3Q68DQ2 2970 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 FER1L5A0AVI2 2057 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 A0A0U1RQJ8 604 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 KRT87PA6NCN2 255 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ARHGEF33A8MVX0 844 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 FAM227AF5H4B4 570 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 H0YIG0 161 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 FOXS1O43638 330 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 NIPSNAP2O75323 286 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PSIP1O75475 530 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SEC24DO94855 1032 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 VAPBO95292 243 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CLDN14O95500 239 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 MPIG6BO95866 241 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 MTHFD2P13995 350 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CAPN3P20807 821 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 HRH2P25021 359 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 NMBRP28336 390 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 EEF1DP29692 281 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 NPY2RP49146 381 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 AGTR2P50052 363 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PNLIPRP1P54315 467 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ADARP55265 1226 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TAS2R50P59544 299 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 YBX1P67809 324 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CRADDP78560 199 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 BASP1P80723 227 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 MAT1AQ00266 395 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SRSF2Q01130 221 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PMP22Q01453 160 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SNX1Q13596 522 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PTK6Q13882 451 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 GBX1Q14549 363 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ACAP2Q15057 778 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 EXT1Q16394 746 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 C3AR1Q16581 482 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 MEP1AQ16819 746 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SYT16Q17RD7 645 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TYSND1Q2T9J0 566 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 KLHL38Q2WGJ6 581 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TOR2AQ5JU69 321 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CTSL3PQ5NE16 218 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ACER2Q5QJU3 275 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 THEMIS2Q5TEJ8 643 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ICE2Q659A1 982 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF425Q6IV72 752 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TEPPQ6URK8 271 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 RAD9BQ6WBX8 426 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SLC13A5Q86YT5 568 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CEP97Q8IW35 865 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 SLC5A8Q8N695 610 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TMEM178AQ8NBL3 297 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 C1orf54Q8WWF1 131 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 LPGAT1Q92604 370 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 FAM136AQ96C01 138 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 MTFMTQ96DP5 389 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 HES6Q96HZ4 224 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 RAX2Q96IS3 184 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 IMMP1LQ96LU5 166 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 GPR137Q96N19 417 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 BIRC8Q96P09 236 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CYTH2Q99418 400 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PKP4Q99569 1192 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 UTP23Q9BRU9 249 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TSGA10Q9BZW7 698 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 VN1R1Q9GZP7 353 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CCDC68Q9H2F9 335 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 KCNK13Q9HB14 408 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 EIF2B3Q9NR50 452 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 KLHL1Q9NR64 748 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 ABCF3Q9NUQ8 709 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 TINAGQ9UJW2 476 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 REXO2Q9Y3B8 237 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 DIDO1Q9BTC0 2240 aaKnown RBP5.53□□□□□ -1.52
CSDE1-207ENST00000483407 CNTRLQ7Z7A1 2325 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 LRBAP50851 2863 aa5.53□□□□□ -1.52
CSDE1-207ENST00000483407 PCM1Q15154 2024 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 IGHV3-20A0A0C4DH32 117 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 IGKV1-8A0A0C4DH67 115 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OR14I1A6ND48 311 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ASPDHA6ND91 283 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 E7ENX8 843 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 NPIPA5E9PKD4 350 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 HAT1O14929 419 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 P2RX6O15547 441 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ZBTB14O43829 449 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 KIF5CO60282 957 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 NSA2O95478 260 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 IL33O95760 270 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms