RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 DEPDC1Q5TB30 811 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 MFSD4BQ5TF39 518 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 FRG2Q64ET8 278 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 TRIM40Q6P9F5 258 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 TMEM205Q6UW68 189 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 FRMD7Q6ZUT3 714 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 GPRIN3Q6ZVF9 776 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 FAM47BQ8NA70 645 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 MYRIPQ8NFW9 859 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 OR11G2Q8NGC1 345 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 RDH11Q8TC12 318 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 PPP4R1Q8TF05 950 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 APOBEC4Q8WW27 367 aaKnown RBP9.96□□□□□ -0.82
SSBP1-210ENST00000481508 THAP4Q8WY91 577 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 CMTM7Q96FZ5 175 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 FRG2BQ96QU4 278 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 SMC6Q96SB8 1091 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 ING2Q9H160 280 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 NECTIN3Q9NQS3 549 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 SEMA3GQ9NS98 782 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 KCMF1Q9P0J7 381 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 TIMM22Q9Y584 194 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 CLDN16Q9Y5I7 305 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 LOC102723996A0A087X1L8 192 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MYOCOSA0A1B0GUC4 107 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 URADA6NGE7 173 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MANBAO00462 879 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 TMPRSS11DO60235 418 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 B4GALT2O60909 372 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PRKRAO75569 313 aaKnown RBP9.95□□□□□ -0.82
SSBP1-210ENST00000481508 SCELO95171 688 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 FHP07954 510 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 CD63P08962 238 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MAOAP21397 527 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 SERPINB1P30740 379 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 BSGP35613 385 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PIK3CBP42338 1070 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 CCL11P51671 97 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MTTPP55157 894 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 LIM2P55344 173 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 RAB38P57729 211 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 LCP2Q13094 533 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 RAPSNQ13702 412 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PCOLCEQ15113 449 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 DCAF10Q5QP82 559 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 LIPMQ5VYY2 423 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 TTC19Q6DKK2 380 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-210ENST00000481508 SCIMPQ6UWF3 145 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 APLFQ8IW19 511 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-210ENST00000481508 CNPY4Q8N129 248 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 ACOT4Q8N9L9 421 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 UCN3Q969E3 161 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 TBC1D20Q96BZ9 403 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PGM2Q96G03 612 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 FAR2Q96K12 515 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 SERINC2Q96SA4 455 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MAPKAP1Q9BPZ7 522 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 WDR77Q9BQA1 342 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MRPL1Q9BYD6 325 aaKnown RBP9.95□□□□□ -0.82
SSBP1-210ENST00000481508 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 ZNF160Q9HCG1 818 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PRM3Q9NNZ6 103 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MLXIPLQ9NP71 852 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 MID1IP1Q9NPA3 183 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 PTGDR2Q9Y5Y4 395 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 F8P00451 2351 aa9.95□□□□□ -0.82
SSBP1-210ENST00000481508 CROCCQ5TZA2 2017 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 IGKV3D-11A0A0A0MRZ8 115 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 IGHV1-45A0A0A0MS14 117 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 A0A0A6YYD5 115 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 A6NL46 340 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 FOXE1O00358 373 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-210ENST00000481508 CYR61O00622 381 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 B3GALT2O43825 422 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 CEACAM4O75871 244 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 ESRRBO95718 433 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 MLYCDO95822 493 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 GBAP04062 536 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 CHRNGP07510 517 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
SSBP1-210ENST00000481508 ACPPP15309 386 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 HIST1H1TP22492 207 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-210ENST00000481508 SERPINB3P29508 390 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 PPP2R1BP30154 601 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 SSR2P43308 183 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 PKNOX1P55347 436 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 HNRNPH2P55795 449 aaKnown RBP9.94□□□□□ -0.82
SSBP1-210ENST00000481508 IFT88Q13099 833 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 KCNAB2Q13303 367 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 CUL3Q13618 768 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
SSBP1-210ENST00000481508 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 TMEM35AQ53FP2 167 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 OR4C11Q6IEV9 310 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 ANKRD37Q7Z713 158 aa9.94□□□□□ -0.82
SSBP1-210ENST00000481508 SCUBE1Q8IWY4 988 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms