RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 CMTM7Q96FZ5 175 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ZNF354BQ96LW1 612 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 KCNC2Q96PR1 638 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 SLC29A3Q9BZD2 475 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CDCP1Q9H5V8 836 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 NOL11Q9H8H0 719 aaKnown RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ZBTB26Q9HCK0 441 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 PCTPQ9UKL6 214 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 FBXW2Q9UKT8 454 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 MMACHCQ9Y4U1 282 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 TNPO3Q9Y5L0 923 aaKnown RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 TRAV17A0A0B4J275 112 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 A0A1B0GTL3 188 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 OR5H15A6NDH6 313 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 LDB3O75112 727 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SMIM24O75264 130 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SEMA7AO75326 666 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 MYO1DO94832 1006 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ETHE1O95571 254 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 COL6A2P12110 1019 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TSPAN8P19075 237 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 HPDP32754 393 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SSR2P43308 183 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ID2Q02363 134 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TGM3Q08188 693 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TUBA3CQ13748 450 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 MEP1AQ16819 746 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 AP5B1Q2VPB7 878 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 OR4C11Q6IEV9 310 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TUBA3EQ6PEY2 450 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 FAM26EQ8N5C1 309 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ARMC2Q8NEN0 867 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SIGLEC12Q96PQ1 595 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TAAR6Q96RI8 345 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 BARD1Q99728 777 aaKnown RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TBCDQ9BTW9 1192 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 HES7Q9BYE0 225 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 L2HGDHQ9H9P8 463 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 SEMA4BQ9NPR2 832 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-215ENST00000481116 DMRT3Q9NQL9 472 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TMEM216Q9P0N5 145 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 TEKT2Q9UIF3 430 aa12.04□□□□□ -0.48
ABCF3-215ENST00000481116 ASH1LQ9NR48 2969 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CROCCQ5TZA2 2017 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 ANKUB1A6NFN9 424 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 GABRR3A8MPY1 467 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 A8MT66 165 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 STX16-NPEPL1H3BU86 382 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PPP6CO00743 305 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CLDN4O14493 209 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PLPP1O14494 284 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 STX16O14662 325 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PRKRAO75569 313 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CLDN9O95484 217 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 SHBGP04278 402 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 HIST1H1TP22492 207 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CD96P40200 585 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PIK3CBP42338 1070 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CCNG1P51959 295 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 CDH13P55290 713 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 HSD17B7P56937 341 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PMP22Q01453 160 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 SLAMF1Q13291 335 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 TMEM35AQ53FP2 167 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 FHL5Q5TD97 284 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 LGSNQ5TDP6 509 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 ZNF468Q5VIY5 522 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 SPINK14Q6IE38 97 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 TIFABQ6ZNK6 161 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 ZNF595Q8IYB9 648 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 L3MBTL4Q8NA19 623 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 SRFBP1Q8NEF9 429 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 FAR1Q8WVX9 515 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 RGMAQ96B86 450 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 MRPL57Q9BQC6 102 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 RNF32Q9H0A6 362 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 MRPL46Q9H2W6 279 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 AGPAT4Q9NRZ5 378 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 ZNF223Q9UK11 482 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 MRPS33Q9Y291 106 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
ABCF3-215ENST00000481116 SETXQ7Z333 2677 aaKnown RBP12.03□□□□□ -0.48
ABCF3-215ENST00000481116 UTP20O75691 2785 aaKnown RBP12.02□□□□□ -0.48
ABCF3-215ENST00000481116 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.49
ABCF3-215ENST00000481116 A0A1W2PPM1 405 aa12.02□□□□□ -0.49
ABCF3-215ENST00000481116 WASHC1A8K0Z3 465 aa12.02□□□□□ -0.49
ABCF3-215ENST00000481116 H0YIV9 168 aa12.02□□□□□ -0.49
ABCF3-215ENST00000481116 PRKNO60260 465 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms