RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CDCP1Q9H5V8 836 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 ACSS3Q9H6R3 686 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 CHST11Q9NPF2 352 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 TIMMDC1Q9NPL8 285 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 YARS2Q9Y2Z4 477 aaKnown RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 KLF2Q9Y5W3 355 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 MAST4O15021 2626 aa10.71□□□□□ -0.7
CCM2-213ENST00000480658 NBASA2RRP1 2371 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 PRRC2CQ9Y520 2896 aaKnown RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 A0A096LPK6 155 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 TRBV11-1A0A0K0K1C0 115 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CTAGE15A4D2H0 777 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SLC19A2O60779 497 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 NEURL1O76050 574 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 C1QAP02745 245 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 IFNA16P05015 189 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CTAGE8P0CG41 777 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 COL6A2P12110 1019 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 PTX3P26022 381 aaPredicted RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 TPP2P29144 1249 aaPredicted RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 CA7P43166 264 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SSR2P43308 183 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SMSP52788 366 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 PLIN5Q00G26 463 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 GUCY2DQ02846 1103 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 ART3Q13508 389 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SETDB1Q15047 1291 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 KHDRBS2Q5VWX1 349 aaKnown RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 PAOXQ6QHF9 649 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 HSDL2Q6YN16 418 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 RGS9BPQ6ZS82 235 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CMC1Q7Z7K0 106 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CTAGE6Q86UF2 777 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CTAGE4Q8IX94 777 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 CYP4Z2PQ8N1L4 340 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SPATA6LQ8N4H0 392 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 APCDD1LQ8NCL9 501 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
CCM2-213ENST00000480658 FRMD6Q96NE9 622 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 QRFPRQ96P65 431 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 MS4A8Q9BY19 250 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 FUT8Q9BYC5 575 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 KLHL31Q9H511 634 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 ACTR8Q9H981 624 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 WDR41Q9HAD4 459 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 SNX15Q9NRS6 342 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 VTI1BQ9UEU0 232 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 PPT2Q9UMR5 302 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 ENTPD4Q9Y227 616 aa10.7□□□□□ -0.7
CCM2-213ENST00000480658 ESPL1Q14674 2120 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 TRGV8A0A0C4DH27 118 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 H0YIV9 168 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ACOT7O00154 380 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 CYR61O00622 381 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 HNRNPRO43390 633 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 SMIM24O75264 130 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 F10P00742 488 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ESRRAP11474 423 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 PCNAP12004 261 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 CERS1P27544 350 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 SSR4P51571 173 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 BTG2P78543 158 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 MRPS25P82663 173 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 BMPR2Q13873 1038 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 PCBP2Q15366 365 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCM2-213ENST00000480658 UAP1Q16222 522 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 MAPKAPK3Q16644 382 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 MROH9Q5TGP6 573 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 SPINK14Q6IE38 97 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 XKRXQ6PP77 449 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 GALNTL5Q7Z4T8 443 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 FJX1Q86VR8 437 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZCCHC7Q8N3Z6 543 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZNF808Q8N4W9 903 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 NFAM1Q8NET5 270 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 OR7G3Q8NG95 312 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZNF473Q8WTR7 871 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 TANKQ92844 425 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 RGMAQ96B86 450 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 RBM18Q96H35 190 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 SGCZQ96LD1 299 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 SIGLEC12Q96PQ1 595 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 NECTIN3Q9NQS3 549 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 PNO1Q9NRX1 252 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 IGSF5Q9NSI5 407 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZDHHC18Q9NUE0 388 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 LYARQ9NX58 379 aaKnown RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZNF180Q9UJW8 692 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 FBXW2Q9UKT8 454 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 ZNF490Q9ULM2 529 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 ERVK-11Q9UQG0 969 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 DOPEY1Q5JWR5 2465 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 RP1L1Q8IWN7 2480 aaPredicted RBP10.69□□□□□ -0.7
CCM2-213ENST00000480658 COL12A1Q99715 3063 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 DOCK10Q96BY6 2186 aa10.69□□□□□ -0.7
CCM2-213ENST00000480658 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 A0A087WUV0 522 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms