RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TRAF6Q9Y4K3 522 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 SPACA6W5XKT8 324 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 BLACEA4D250 179 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 NPIPB8E9PQR5 432 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 JRKO75564 520 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 ITGB2P05107 769 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 HEXBP07686 556 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 OTX2P32243 289 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 PPP2R2AP63151 447 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 STX3Q13277 289 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 UGT3A2Q3SY77 523 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 SH2D4BQ5SQS7 431 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 ATP1A1-AS1Q5TC04 95 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 MRM1Q6IN84 353 aaKnown RBP18.6■□□□□ 0.57
LIME1-205ENST00000480139 C19orf48Q6RUI8 117 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 QSOX2Q6ZRP7 698 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 MRGPREQ86SM8 312 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 PRSS58Q8IYP2 241 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 PLPP5Q8NEB5 264 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 CRELD1Q96HD1 420 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 METTL2AQ96IZ6 378 aaKnown RBP18.6■□□□□ 0.57
LIME1-205ENST00000480139 VPS50Q96JG6 964 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 SORBS1Q9BX66 1292 aaKnown RBP18.6■□□□□ 0.57
LIME1-205ENST00000480139 LYARQ9NX58 379 aaKnown RBP18.6■□□□□ 0.57
LIME1-205ENST00000480139 SIRT5Q9NXA8 310 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 PHF11Q9UIL8 331 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 HAO1Q9UJM8 370 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 MRPS33Q9Y291 106 aaKnown RBP18.6■□□□□ 0.57
LIME1-205ENST00000480139 DNAJC15Q9Y5T4 150 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 HS3ST3B1Q9Y662 390 aa18.6■□□□□ 0.57
LIME1-205ENST00000480139 CYR61O00622 381 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 ITM2AO43736 263 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 EEDO75530 441 aaKnown RBP18.59■□□□□ 0.57
LIME1-205ENST00000480139 PRPH2P23942 346 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 SERPINB3P29508 390 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 SLC1A6P48664 564 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 EFNA3P52797 238 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 RHAGQ02094 409 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 BST1Q10588 318 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 SLAMF1Q13291 335 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 MINDY4Q4G0A6 757 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 SPIN4Q56A73 249 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 CYP20A1Q6UW02 462 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 TMEM205Q6UW68 189 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 COMMD6Q7Z4G1 85 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 ZNF595Q8IYB9 648 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 CHTF18Q8WVB6 975 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 CCT7Q99832 543 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 RBCK1Q9BYM8 510 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 ZDHHC2Q9UIJ5 367 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 RAP2CQ9Y3L5 183 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 MMACHCQ9Y4U1 282 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 CCL27Q9Y4X3 112 aa18.59■□□□□ 0.57
LIME1-205ENST00000480139 PCSK5Q92824 1860 aa18.58■□□□□ 0.57
LIME1-205ENST00000480139 LOC102723996A0A087X1L8 192 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 SYNDIG1LA6NDD5 238 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 SLC28A1O00337 649 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 SOCS6O14544 535 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 KLF11O14901 512 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 ALOX12BO75342 701 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 LYPLA1O75608 230 aaPredicted RBP18.58■□□□□ 0.56
LIME1-205ENST00000480139 RSL1D1O76021 490 aaKnown RBP18.58■□□□□ 0.56
LIME1-205ENST00000480139 CHN1P15882 459 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 TPP2P29144 1249 aaPredicted RBP18.58■□□□□ 0.56
LIME1-205ENST00000480139 HSD17B7P56937 341 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 HMGCS1Q01581 520 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 ATG16L1Q676U5 607 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 GALNT18Q6P9A2 607 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 GPR180Q86V85 440 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 TWIST2Q8WVJ9 160 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 METTL21AQ8WXB1 218 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 C11orf24Q96F05 449 aaPredicted RBP18.58■□□□□ 0.56
LIME1-205ENST00000480139 SORT1Q99523 831 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 MAPKAP1Q9BPZ7 522 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 C20orf27Q9GZN8 174 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 ILKAPQ9H0C8 392 aaPredicted RBP18.58■□□□□ 0.56
LIME1-205ENST00000480139 PRDM9Q9NQV7 894 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 MAN2B2Q9Y2E5 1009 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 ASB4Q9Y574 426 aa18.58■□□□□ 0.56
LIME1-205ENST00000480139 ARHGAP10A1A4S6 786 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 TMEM233B4DJY2 109 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 PEX12O00623 359 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 CLDN4O14493 209 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 TMPRSS11DO60235 418 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 PRMT3O60678 531 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 SNNO75324 88 aaPredicted RBP18.57■□□□□ 0.56
LIME1-205ENST00000480139 CDC123O75794 336 aaPredicted RBP18.57■□□□□ 0.56
LIME1-205ENST00000480139 FAM58BPP0C7Q3 252 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 C8orf89P0DMQ9 161 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 RHDQ02161 417 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 TNFRSF17Q02223 184 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 ATP1A4Q13733 1029 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 IMPG1Q17R60 797 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 MFSD4BQ5TF39 518 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 SCIMPQ6UWF3 145 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 KIRREL2Q6UWL6 708 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 APLFQ8IW19 511 aaPredicted RBP18.57■□□□□ 0.56
LIME1-205ENST00000480139 SCUBE1Q8IWY4 988 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 C1orf52Q8N6N3 182 aaKnown RBP18.57■□□□□ 0.56
LIME1-205ENST00000480139 TMEM102Q8N9M5 508 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms