RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 NOBOXO60393 691 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 CTSVO60911 334 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 PIAS2O75928 621 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 KCNK5O95279 499 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 B3GALT4O96024 378 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TDGF1P13385 188 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 MAOBP27338 520 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 PCGF2P35227 344 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 RXRGP48443 463 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 CHRNB3Q05901 458 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 SLAMF1Q13291 335 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 GAB1Q13480 694 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 RGNQ15493 299 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 ATP6AP1Q15904 470 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 ZC3H12BQ5HYM0 836 aaKnown RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 INTS11Q5TA45 600 aaKnown RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 NDUFAF5Q5TEU4 345 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 LPCAT4Q643R3 524 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 NIPAL1Q6NVV3 410 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 ABHD13Q7L211 337 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TRIM73Q86UV7 250 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 KBTBD2Q8IY47 623 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TMEFF1Q8IYR6 380 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 SAMD14Q8IZD0 417 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 ICA1LQ8NDH6 482 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 UTP15Q8TED0 518 aaKnown RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 LRTOMTQ8WZ04 291 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 FIG4Q92562 907 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 RERGQ96A58 199 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 CIDECQ96AQ7 238 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 CENPNQ96H22 339 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 CD180Q99467 661 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 SLC35A5Q9BS91 424 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 NLNQ9BYT8 704 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TRIM4Q9C037 500 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 PIF1Q9H611 641 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 EPS8L2Q9H6S3 715 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TEX10Q9NXF1 929 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 MS4A12Q9NXJ0 267 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 SUSD2Q9UGT4 822 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 PHF11Q9UIL8 331 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 RPS6KA6Q9UK32 745 aa10.46□□□□□ -0.73
VTI1A-204ENST00000480057 SAMD4AQ9UPU9 718 aaKnown RBP10.46□□□□□ -0.73
VTI1A-204ENST00000480057 TNFRSF21O75509 655 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 TIPRLO75663 272 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 UBXN7O94888 489 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 GNSP15586 552 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 CTSKP43235 329 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 CAPZBP47756 277 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 MVDP53602 400 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 MAZP56270 477 aaKnown RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SLC14A1Q13336 389 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 CEBPEQ15744 281 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 PRSS53Q2L4Q9 553 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 GRAMD1BQ3KR37 738 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 C14orf28Q4W4Y0 310 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SFT2D3Q587I9 215 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 LYSMD4Q5XG99 296 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SAXO2Q658L1 398 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 ZCCHC8Q6NZY4 707 aaKnown RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 TMEM64Q6YI46 380 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF551Q7Z340 670 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 PTOV1Q86YD1 416 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 C11orf65Q8NCR3 313 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 OR8K5Q8NH50 307 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 EDAQ92838 391 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 NCLNQ969V3 563 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 EME1Q96AY2 570 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 PPWD1Q96BP3 646 aaKnown RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 MOAP1Q96BY2 351 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 NEURL3Q96EH8 262 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SLC38A3Q99624 504 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 DPH2Q9BQC3 489 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 NPLQ9BXD5 320 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 Q9H521 79 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 TMEM38AQ9H6F2 299 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 LYRM4Q9HD34 91 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SLC35C2Q9NQQ7 365 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 C1GALT1Q9NS00 363 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 EVA1BQ9NVM1 165 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 THUMPD1Q9NXG2 353 aaKnown RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 EPHA6Q9UF33 1036 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 PSME2Q9UL46 239 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 KLHL20Q9Y2M5 609 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
VTI1A-204ENST00000480057 SNRNP200O75643 2136 aaKnown RBP10.45□□□□□ -0.74
VTI1A-204ENST00000480057 A0A0J9YVX5 310 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 A0A1W2PR48 441 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 MYO1GB0I1T2 1018 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 C4orf51C9J302 202 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 H0YGG7 62 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PPM1DO15297 605 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PROM1O43490 865 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 SRPX2O60687 465 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 DEAF1O75398 565 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PRSS23O95084 383 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 LDLRP01130 860 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PROS1P07225 676 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms