RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	FOXM1	Q08050	763 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	RUNX2	Q13950	521 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PRTG	Q2VWP7	1150 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	GTDC1	Q4AE62	458 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PIGG	Q5H8A4	983 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	RABL3	Q5HYI8	236 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	ANXA8L1	Q5VT79	327 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	C18orf63	Q68DL7	685 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-223	ENST00000479656	MSANTD1	Q6ZTZ1	278 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	CARF	Q8N187	725 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	FAM156A	Q8NDB6	213 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	VPS37A	Q8NEZ2	397 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	WDR60	Q8WVS4	1066 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	N4BP2L2	Q92802	583 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PANX1	Q96RD7	426 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	SERINC2	Q96SA4	455 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	LRFN3	Q9BTN0	628 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-223	ENST00000479656	ROGDI	Q9GZN7	287 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	CHRNA10	Q9GZZ6	450 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	ATAD3A	Q9NVI7	634 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	IRAK4	Q9NWZ3	460 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	FAM120C	Q9NX05	1096 aa	Known RBP	10.63	□□□□□ -0.71
APTX-223	ENST00000479656	CMTM6	Q9NX76	183 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	SEMA5B	Q9P283	1151 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	GMPR2	Q9P2T1	348 aa	Known RBP	10.63	□□□□□ -0.71
APTX-223	ENST00000479656	MAN2B2	Q9Y2E5	1009 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PCDHB14	Q9Y5E9	798 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PCDHGB2	Q9Y5G2	931 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	PCDHA9	Q9Y5H5	950 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	SLC22A7	Q9Y694	548 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	MYO15A	Q9UKN7	3530 aa		10.63	□□□□□ -0.71
APTX-223	ENST00000479656	SCN3A	Q9NY46	2000 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PRORSD1P	A6NEY8	169 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ZNF860	A6NHJ4	632 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	GLOD5	A6NK44	160 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	NME4	O00746	187 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	TXNDC9	O14530	226 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PGRMC2	O15173	223 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PROM1	O43490	865 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	B3GALT2	O43825	422 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	GUCY1B2	O75343	617 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ERN1	O75460	977 aa	Known RBP	10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ANP32D	O95626	131 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	LDOC1	O95751	146 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-223	ENST00000479656	DRD2	P14416	443 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	GRK6	P43250	576 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	SPEM2	Q0P670	501 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	GPR19	Q15760	415 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PRMT9	Q6P2P2	845 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ZNF621	Q6ZSS3	439 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PRSS42	Q7Z5A4	293 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PDSS2	Q86YH6	399 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	MSRB3	Q8IXL7	192 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	SHISA5	Q8N114	240 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	D2HGDH	Q8N465	521 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ARHGEF39	Q8N4T4	335 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	DTWD1	Q8N5C7	304 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	FAM47B	Q8NA70	645 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	PRSS33	Q8NF86	280 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	KLHL6	Q8WZ60	621 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	TMEM125	Q96AQ2	219 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	CCDC124	Q96CT7	223 aa	Known RBP	10.62	□□□□□ -0.71
APTX-223	ENST00000479656	CNDP2	Q96KP4	475 aa	Known RBP	10.62	□□□□□ -0.71
APTX-223	ENST00000479656	ZNF285	Q96NJ3	590 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	FAIM2	Q9BWQ8	316 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-223	ENST00000479656	SLC25A37	Q9NYZ2	338 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	NAALAD2	Q9Y3Q0	740 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	NEUROG3	Q9Y4Z2	214 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656	RP1	P56715	2156 aa		10.62	□□□□□ -0.71
APTX-223	ENST00000479656		A0A096LPI6	279 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	HYKK	A2RU49	373 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	AGRP	O00253	132 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	RNASET2	O00584	256 aa	Known RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	GALR3	O60755	368 aa	Predicted RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	MED26	O95402	600 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	AIFM1	O95831	613 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	FOLR1	P15328	257 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	CKMT2	P17540	419 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	NELFE	P18615	380 aa	Known RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	ZNF10	P21506	573 aa	Predicted RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	ME2	P23368	584 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	PTPN6	P29350	595 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	TRPC1	P48995	793 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	LIM2	P55344	173 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	SELPLG	Q14242	412 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	RUNDC3A	Q59EK9	446 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	LRIF1	Q5T3J3	769 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	OR5T3	Q8NGG3	340 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	DNAJB8	Q8NHS0	232 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	EXOSC8	Q96B26	276 aa	Known RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	SLC41A2	Q96JW4	573 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	ANKRD27	Q96NW4	1050 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	GBP5	Q96PP8	586 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	LYAR	Q9NX58	379 aa	Known RBP	10.61	□□□□□ -0.71
APTX-223	ENST00000479656	KCMF1	Q9P0J7	381 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	ABCD2	Q9UBJ2	740 aa		10.61	□□□□□ -0.71
APTX-223	ENST00000479656	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms