RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 IL23RQ5VWK5 629 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 AGTRAPQ6RW13 159 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 SPESP1Q6UW49 350 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 FAM92BQ6ZTR7 304 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PRSS42Q7Z5A4 293 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ISCA2Q86U28 154 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ZBTB46Q86UZ6 589 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 TRABD2AQ86V40 505 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 KMT5CQ86Y97 462 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 RASGRP3Q8IV61 690 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 SLC22A9Q8IVM8 553 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ADGRF3Q8IZF5 1079 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ST13P4Q8IZP2 240 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CENPLQ8N0S6 344 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 LSMEM2Q8N112 164 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 C4orf33Q8N1A6 199 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 SPATA6LQ8N4H0 392 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 C2orf73Q8N5S3 287 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PDPRQ8NCN5 879 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PPFIBP2Q8ND30 876 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 MZB1Q8WU39 189 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF480Q8WV37 535 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 DLG3Q92796 817 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NACC2Q96BF6 587 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CCDC126Q96EE4 140 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 APOPT1Q96IL0 206 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 IL17FQ96PD4 163 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 KCNC2Q96PR1 638 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CMKLR1Q99788 373 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NUDT22Q9BRQ3 303 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 MENTQ9BUN1 341 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 UNKQ9C0B0 810 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 MS4A5Q9H3V2 200 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PDE7BQ9NP56 450 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PALMDQ9NP74 551 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 MRPS30Q9NP92 439 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ABCF3Q9NUQ8 709 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 SOHLH2Q9NX45 425 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 MKS1Q9NXB0 559 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 EURLQ9NYK6 297 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ANKMY1Q9P2S6 941 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 XPR1Q9UBH6 696 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ASH2LQ9UBL3 628 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 POMT2Q9UKY4 750 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CARD8Q9Y2G2 431 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ARL2BPQ9Y2Y0 163 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ANGPTL3Q9Y5C1 460 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 GOLGA4Q13439 2230 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ANKRD12Q6UB98 2062 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PCM1Q15154 2024 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CCDC187A0A096LP49 1063 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 A0A0J9YVX5 310 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 IGHV5-10-1A0A0J9YXX1 117 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ZC3H12DA2A288 527 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PCNX2A6NKB5 2137 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 A8MU76 341 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TARM1B6A8C7 271 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 E7ENX8 843 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 UBXN8O00124 270 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 BTN3A3O00478 584 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CCNT2O60583 730 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PEX11AO75192 247 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 H2AFYO75367 372 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 STK16O75716 305 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 WDR47O94967 919 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 HNRNPCP07910 306 aaKnown RBP eCLIP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ANKRD34CP0C6C1 535 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 MYL2P10916 166 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 UGT2B7P16662 529 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PTX3P26022 381 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CSF2RBP32927 897 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CSRP3P50461 194 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ALDH18A1P54886 795 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 GFERP55789 205 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 NAA20P61599 178 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TBPL1P62380 186 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TUBA1BP68363 451 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PHC1P78364 1004 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 HSD11B2P80365 405 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ACY1Q03154 408 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TAP2Q03519 686 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 SLC18A2Q05940 514 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 DLG1Q12959 904 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 FASTKQ14296 549 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 GRB7Q14451 532 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RCN1Q15293 331 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PFKFB4Q16877 469 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ISXQ2M1V0 245 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CCSMST1Q4G0I0 132 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TNFAIP8L3Q5GJ75 292 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 N4BP2L1Q5TBK1 243 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 METTL2BQ6P1Q9 378 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM53Q6P2H8 277 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 DHRS4L2Q6PKH6 230 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 SUSD1Q6UWL2 747 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 LCTLQ6UWM7 567 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TUBA1AQ71U36 451 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms