RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ATP6V1HQ9UI12 483 aa10.33□□□□□ -0.76
VPS52-217ENST00000478934 PAIP2BQ9ULR5 123 aaKnown RBP10.33□□□□□ -0.76
VPS52-217ENST00000478934 PADI2Q9Y2J8 665 aa10.33□□□□□ -0.76
VPS52-217ENST00000478934 A0A1W2PRB8 838 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 ZNF197O14709 1029 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 TLL1O43897 1013 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 PTHP01270 115 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 POU1F1P28069 291 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 FEN1P39748 380 aaKnown RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 HNRNPFP52597 415 aaKnown RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 ST8SIA6P61647 398 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CDK6Q00534 326 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 WDR53Q7Z5U6 358 aaPredicted RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 C11orf96Q7Z7L8 435 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 RBM45Q8IUH3 476 aaKnown RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 OR4C15Q8NGM1 316 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 VMP1Q96GC9 406 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 PITX2Q99697 317 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CHCHD6Q9BRQ6 235 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CENPOQ9BU64 300 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 BHLHE41Q9C0J9 482 aaPredicted RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 QPCTLQ9NXS2 382 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 DKK3Q9UBP4 350 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 MRPS23Q9Y3D9 190 aaKnown RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 LTBP2Q14767 1821 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 LRRK1Q38SD2 2015 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 E9PQ18 207 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 KDM1AO60341 852 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 GPR37L1O60883 481 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 B4GALT2O60909 372 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 SPNP16150 400 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 ACADLP28330 430 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CD40LGP29965 261 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 OPRD1P41143 372 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 WASP42768 502 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 CXCR4P61073 352 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 EEF1A2Q05639 463 aaKnown RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 TMC5Q6UXY8 1006 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 LAS2Q8IYD9 372 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 ANKRD53Q8N9V6 530 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 OR52N2Q8NGI0 321 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 MAGEB10Q96LZ2 347 aaPredicted RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 SIGLEC11Q96RL6 698 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 FAM129BQ96TA1 746 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 ITPAQ9BY32 194 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 KLHL25Q9H0H3 589 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CCDC177Q9NQR7 707 aaPredicted RBP10.32□□□□□ -0.76
VPS52-217ENST00000478934 ACER3Q9NUN7 267 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 TAC3Q9UHF0 121 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 PCDHGA2Q9Y5H1 932 aa10.32□□□□□ -0.76
VPS52-217ENST00000478934 CXorf51AA0A1B0GTR3 108 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 TRBC2A0A5B9 178 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 HEPACAM2A8MVW5 462 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 RFXAPO00287 272 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 PLPP1O14494 284 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 FFAR1O14842 300 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 SEMA7AO75326 666 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 GASTP01350 101 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 ADRB3P13945 408 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 GGT2P36268 569 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 GJA8P48165 433 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 SERPINB10P48595 397 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 HTRA4P83105 476 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 PUM1Q14671 1186 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS52-217ENST00000478934 TCEA2Q15560 299 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 IFI44LQ53G44 452 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 TMIGD1Q6UXZ0 262 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 PLEKHG7Q6ZR37 379 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 KLHDC8AQ8IYD2 350 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 SVOPQ8N4V2 548 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 GABARAPL3Q9BY60 117 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 TAS2R9Q9NYW1 312 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 OSGIN1Q9UJX0 560 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 H7BY64 318 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 AQP9O43315 295 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 PRKRAO75569 313 aaKnown RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS52-217ENST00000478934 LRRC74AQ0VAA2 488 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 ST3GAL4Q11206 333 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 PDE7AQ13946 482 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 E2F2Q14209 437 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 MICAQ29983 383 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 NCCRP1Q6ZVX7 275 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 BCDIN3DQ7Z5W3 292 aaKnown RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 METTL4Q8N3J2 472 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 DNAJC22Q8N4W6 341 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 HORMAD2Q8N7B1 307 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 GOT1L1Q8NHS2 421 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 RHOXF1Q8NHV9 184 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 ZNF675Q8TD23 568 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 KLK6Q92876 244 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 ZNF707Q96C28 371 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 PRAP1Q96NZ9 151 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 MIEF1Q9NQG6 463 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 FBXO8Q9NRD0 319 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 MS4A12Q9NXJ0 267 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms