RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 AARSD1Q9BTE6 412 aaKnown RBP15.9■□□□□ 0.14
VIM-204ENST00000478746 SPNS1Q9H2V7 528 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 ZNF395Q9H8N7 513 aaPredicted RBP15.9■□□□□ 0.14
VIM-204ENST00000478746 PRTFDC1Q9NRG1 225 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 SACM1LQ9NTJ5 587 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 RTTNQ86VV8 2226 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 PABPN1LA6NDY0 278 aaKnown RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 DVL2O14641 736 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 P04436 131 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 EPXP11678 715 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 BMP5P22003 454 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 SLC1A2P43004 574 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 DNASE1L1P49184 302 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 ASCL1P50553 236 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 HSD17B7P56937 341 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 BTN3A2P78410 334 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 DHX9Q08211 1270 aaKnown RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 FOXO1Q12778 655 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 SLC13A2Q13183 592 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 RBBP5Q15291 538 aaKnown RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 PHKG1Q16816 387 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 TOR1AIP1Q5JTV8 583 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 DRICH1Q6PGQ1 229 aaPredicted RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 HSDL2Q6YN16 418 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 MYO1HQ8N1T3 1032 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 TMEM132CQ8N3T6 1108 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 ANKRD53Q8N9V6 530 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 GOLM1Q8NBJ4 401 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 RELL2Q8NC24 303 aaPredicted RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 OR56A3Q8NH54 315 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 NEIL2Q969S2 332 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 SGCZQ96LD1 299 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 SH3GL2Q99962 352 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 ADAP2Q9NPF8 381 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 ARL15Q9NXU5 204 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 TUBA8Q9NY65 449 aaPredicted RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 FOXD3Q9UJU5 478 aaPredicted RBP15.89■□□□□ 0.13
VIM-204ENST00000478746 CLCA3PQ9Y6N3 262 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 CSPG4Q6UVK1 2322 aa15.89■□□□□ 0.13
VIM-204ENST00000478746 CTAGE15A4D2H0 777 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 TUBAL3A6NHL2 446 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 IFNA16P05015 189 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 TACR1P25103 407 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 HK2P52789 917 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 NKX6-1P78426 367 aaPredicted RBP15.88■□□□□ 0.13
VIM-204ENST00000478746 RUNX2Q13950 521 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 BBS9Q3SYG4 887 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 SHEQ5VZ18 495 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 CTAGE6Q86UF2 777 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 TXLNBQ8N3L3 684 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 CALML6Q8TD86 181 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 SLC5A11Q8WWX8 675 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 FAR2Q96K12 515 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 REPIN1Q9BWE0 567 aaKnown RBP15.88■□□□□ 0.13
VIM-204ENST00000478746 PLEKHF2Q9H8W4 249 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 SPRR3Q9UBC9 169 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 MTRF1LQ9UGC7 380 aaKnown RBP15.88■□□□□ 0.13
VIM-204ENST00000478746 FBXO5Q9UKT4 447 aa15.88■□□□□ 0.13
VIM-204ENST00000478746 ZCWPW2A0A1B0GU75 182 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 SDR42E2A6NKP2 422 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 C4orf51C9J302 202 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 TGFBR3LH3BV60 316 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 LY6G6DO95868 133 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 SERPINA6P08185 405 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 KCNJ1P48048 391 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 DCAF7P61962 342 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 SIX1Q15475 284 aaPredicted RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 ELAVL1Q15717 326 aaKnown RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 FBXL19-AS1Q494R0 122 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 PAQR3Q6TCH7 311 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 OPN5Q6U736 354 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 SEM1Q6ZVN7 128 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 CAND1Q86VP6 1230 aaKnown RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 LMNTD2Q8IXW0 634 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 ULK2Q8IYT8 1036 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 FBXW8Q8N3Y1 598 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 ATL1Q8WXF7 558 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 TSNARE1Q96NA8 513 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 AIF1LQ9BQI0 150 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 NPLQ9BXD5 320 aaPredicted RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 TRIM54Q9BYV2 358 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 SEMA4BQ9NPR2 832 aaPredicted RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 C20orf96Q9NUD7 363 aaPredicted RBP15.87■□□□□ 0.13
VIM-204ENST00000478746 TAS2R13Q9NYV9 303 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 ATG4BQ9Y4P1 393 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 PCDHGB3Q9Y5G1 929 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 CLDN16Q9Y5I7 305 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 MAD1L1Q9Y6D9 718 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 CAPN6Q9Y6Q1 641 aa15.87■□□□□ 0.13
VIM-204ENST00000478746 CCL3P10147 92 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 ENDOUP21128 410 aaKnown RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 SAT1P21673 171 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 HNRNPFP52597 415 aaKnown RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 AP1S2P56377 157 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 CCZ1BP86790 482 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 CCZ1P86791 482 aaPredicted RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 REEP5Q00765 189 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 TIAL1Q01085 375 aaKnown RBP eCLIP15.86■□□□□ 0.13
VIM-204ENST00000478746 PCBP2Q15366 365 aaKnown RBP eCLIP15.86■□□□□ 0.13
VIM-204ENST00000478746 KCTD19Q17RG1 926 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms