RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SPC24Q8NBT2 197 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR13C3Q8NGS6 347 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CKAP2Q8WWK9 683 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 ANKRD9Q96BM1 317 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PDLIM5Q96HC4 596 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 SENP5Q96HI0 755 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 C4orf45Q96LM5 186 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCDC43Q96MW1 224 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 NDNQ99608 321 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCDC3Q9BQI4 270 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 API5Q9BZZ5 524 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 COA1Q9GZY4 146 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 UBQLN3Q9H347 655 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 SIX2Q9NPC8 291 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PHPT1Q9NRX4 125 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PNPLA3Q9NST1 481 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 TMEM161AQ9NX61 479 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF624Q9P2J8 865 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 SNX5Q9Y5X3 404 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 RPAP1Q9BWH6 1393 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 MYH6P13533 1939 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 SSC5DA1L4H1 1573 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZSWIM8A7E2V4 1837 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRSS46E5RG02 174 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 NPIPA3F8WFD2 350 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 PLXNB2O15031 1838 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 EXTL3O43909 919 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 KINO60870 393 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 RAD51DO75771 328 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 NADKO95544 446 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 COL2A1P02458 1487 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ERVK-10P10266 1014 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 UROSP10746 265 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 KRT3P12035 628 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 COL11A1P12107 1806 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 EPS15P42566 896 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR3A1P47881 315 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 GCNT1Q02742 428 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCDC57Q2TAC2 916 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF876PQ49A33 203 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM46CQ5VWP2 391 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 KLHL10Q6JEL2 608 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 FUT10Q6P4F1 479 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 CTR9Q6PD62 1173 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM205AQ6ZU69 1335 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 MROH5Q6ZUA9 1318 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 RAPH1Q70E73 1250 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 KCTD9Q7L273 389 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 PIGWQ7Z7B1 504 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ANKRD46Q86W74 232 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 RCOR2Q8IZ40 523 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 DOCK3Q8IZD9 2030 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 NAT8LQ8N9F0 302 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCDC63Q8NA47 563 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR10V1Q8NGI7 309 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 UBLCP1Q8WVY7 318 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ARHGAP45Q92619 1136 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 BCL2L2Q92843 193 aaPredicted RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 TMEM143Q96AN5 459 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 CABS1Q96KC9 395 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 TSSK2Q96PF2 358 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 PITPNM3Q9BZ71 974 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 DBNDD1Q9H9R9 158 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 RAVER2Q9HCJ3 691 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 MID1IP1Q9NPA3 183 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 GPR173Q9NS66 373 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 PLXNA1Q9UIW2 1896 aa3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 NOCTQ9UK39 431 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 RUVBL2Q9Y230 463 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 HBS1LQ9Y450 684 aaKnown RBP3.57□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNFX1Q9P2E3 1918 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF236Q9UL36 1845 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRAV18A0A075B6X5 111 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 C13orf42A0A1B0GVH6 325 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 A0A1W2PRV1 198 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRIM64A6NGJ6 449 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRIM64BA6NI03 449 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCL24O00175 119 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KLF11O14901 512 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TTI1O43156 1089 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CIDEAO60543 219 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 NME6O75414 186 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CIAO1O76071 339 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 DDHD2O94830 711 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CAVIN2O95810 425 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CLPTM1O96005 669 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 GPIP06744 558 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 F3P13726 295 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 DARSP14868 501 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 VCLP18206 1134 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CYP2A7P20853 494 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 PIK3R1P27986 724 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SFTPDP35247 375 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 ADARP55265 1226 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KIAA1024LP59773 190 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KRTAP10-3P60369 221 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 FKBP1BP68106 108 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms