RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SREK1Q8WXA9 508 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PGM2Q96G03 612 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 FER1L6-AS2Q96M78 137 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MAPKAP1Q9BPZ7 522 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TBCDQ9BTW9 1192 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MRPL1Q9BYD6 325 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SLC29A3Q9BZD2 475 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SEMA4CQ9C0C4 833 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ROGDIQ9GZN7 287 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 STMN4Q9H169 189 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MLXIPLQ9NP71 852 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PRDM7Q9NQW5 492 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF71Q9NQZ8 489 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 LANCL2Q9NS86 450 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TSC22D4Q9Y3Q8 395 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TIMM22Q9Y584 194 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 FLNCQ14315 2725 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TENM4Q6N022 2769 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 HELZ2Q9BYK8 2649 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 NSG1A0A0A6YYJ2 146 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 FOXE1O00358 373 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PRMT3O60678 531 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ULK1O75385 1050 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 EEDO75530 441 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ENO1P06733 434 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 COX6A1P12074 109 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 HTR6P50406 440 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 HNRNPFP52597 415 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 FOXA1P55317 472 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PKNOX1P55347 436 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 RAB38P57729 211 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 RHAGQ02094 409 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SLC13A2Q13183 592 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 CUL3Q13618 768 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 CLEC6AQ6EIG7 209 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 OR4C11Q6IEV9 310 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 CYP20A1Q6UW02 462 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SCIMPQ6UWF3 145 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ANKRD37Q7Z713 158 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 NUDT13Q86X67 352 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 APLFQ8IW19 511 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PARP9Q8IXQ6 854 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 GALNT16Q8N428 558 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 AMER2Q8N7J2 671 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ANKRD42Q8N9B4 389 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PPP1R14CQ8TAE6 165 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 C9orf43Q8TAL5 461 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 AGR3Q8TD06 166 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MGARPQ8TDB4 240 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 ABHD17AQ96GS6 310 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 VPS50Q96JG6 964 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PTCHD1Q96NR3 888 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SERPINI1Q99574 410 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 PAIP2Q9BPZ3 127 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SLC25A23Q9BV35 468 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 GATA5Q9BWX5 397 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 NPLQ9BXD5 320 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 GPR83Q9NYM4 423 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 C19orf25Q9UFG5 118 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 DAPP1Q9UN19 280 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 G3BP2Q9UN86 482 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 MRPS33Q9Y291 106 aaKnown RBP6.49□□□□□ -1.37
BRCA1-215ENST00000478531 TP53TG5Q9Y2B4 290 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 SPACA6W5XKT8 324 aa6.49□□□□□ -1.37
BRCA1-215ENST00000478531 CPAMD8Q8IZJ3 1885 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 IGHV1-45A0A0A0MS14 117 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 MYOCOSA0A1B0GUC4 107 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ARHGAP10A1A4S6 786 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 A8MUA0 341 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 HPP00738 406 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CHRNGP07510 517 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CELA2AP08217 269 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NEFHP12036 1026 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 IL10P22301 178 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CPN2P22792 545 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SERPINB3P29508 390 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SERPINB4P48594 390 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 OR4D2P58180 307 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 MAGOHP61326 146 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 HMGCS1Q01581 520 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ID2Q02363 134 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ACTN3Q08043 901 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 AIMP2Q13155 320 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SLAMF1Q13291 335 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 RCN2Q14257 317 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PCOLCEQ15113 449 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SOWAHCQ53LP3 525 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SFT2D3Q587I9 215 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TNFAIP8L3Q5GJ75 292 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 C10orf62Q5T681 223 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 IRAK1BP1Q5VVH5 260 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM205Q6UW68 189 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 QSOX2Q6ZRP7 698 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NDUFAF7Q7L592 441 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 COMMD6Q7Z4G1 85 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CPEB2Q7Z5Q1 589 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CUZD1Q86UP6 607 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 FDCSPQ8NFU4 85 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms