RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ADAP2Q9NPF8 381 aa15.53■□□□□ 0.08
TRIM13-208ENST00000478111 TIMMDC1Q9NPL8 285 aa15.53■□□□□ 0.08
TRIM13-208ENST00000478111 COQ3Q9NZJ6 369 aa15.53■□□□□ 0.08
TRIM13-208ENST00000478111 KCMF1Q9P0J7 381 aa15.53■□□□□ 0.08
TRIM13-208ENST00000478111 DAPP1Q9UN19 280 aa15.53■□□□□ 0.08
TRIM13-208ENST00000478111 HRNRQ86YZ3 2850 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 ZNF469Q96JG9 3925 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 MYOCOSA0A1B0GUC4 107 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 NCF1BA6NI72 391 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 NCF1CA8MVU1 366 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CLDN4O14493 209 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 B3GALT2O43825 422 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 OR2J2O76002 312 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 PDE9AO76083 593 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 NCF1P14598 390 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 TCP1P17987 556 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CD22P20273 847 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CERS1P27544 350 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 DR1Q01658 176 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 TFF3Q07654 80 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 PDIA2Q13087 525 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 ELAVL1Q15717 326 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CEP128Q6ZU80 1094 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CLNKQ7Z7G1 428 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 KRT78Q8N1N4 520 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 SPATA6LQ8N4H0 392 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 PTPMT1Q8WUK0 201 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CCT6BQ92526 530 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 ESAMQ96AP7 390 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 VPS39Q96JC1 886 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 CCDC77Q9BR77 488 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 PITHD1Q9GZP4 211 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 DERL2Q9GZP9 239 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 REXO4Q9GZR2 422 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 DEFB127Q9H1M4 99 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 EHD1Q9H4M9 534 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 PRDM7Q9NQW5 492 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 NPDC1Q9NQX5 325 aaPredicted RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 TRMT1Q9NXH9 659 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 GPRC5BQ9NZH0 403 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 MYOTQ9UBF9 498 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 RNF6Q9Y252 685 aa15.52■□□□□ 0.08
TRIM13-208ENST00000478111 MTO1Q9Y2Z2 717 aaKnown RBP15.52■□□□□ 0.08
TRIM13-208ENST00000478111 A0A0G2JMM0 328 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 A0A1W2PPB8 328 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 A0A1W2PRS3 328 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ANKDD1BA6NHY2 528 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 KIR3DP1A8MWS1 328 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ZSCAN12O43309 604 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF354AO60765 605 aaPredicted RBP15.51■□□□□ 0.07
TRIM13-208ENST00000478111 CTNSO60931 367 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 OR6B1O95007 311 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 TUBB4AP04350 444 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 FREM3P0C091 2139 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 EPORP19235 508 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 FBXO48Q5FWF7 155 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ARHGAP11AQ6P4F7 1023 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 IL20RBQ6UXL0 311 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 FRA10AC1Q70Z53 315 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 UBE3DQ7Z6J8 389 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF321PQ8N8H1 164 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 OR2M7Q8NG81 312 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 LILRB4Q8NHJ6 448 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 WDR34Q96EX3 536 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 RASL10BQ96S79 203 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 SERINC2Q96SA4 455 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 CAPS2Q9BXY5 557 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 UCK2Q9BZX2 261 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 TP63Q9H3D4 680 aaPredicted RBP15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ZDHHC11Q9H8X9 412 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 CAB39LQ9H9S4 337 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 VTI1BQ9UEU0 232 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 ERVK-11Q9UQG0 969 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 MRPS33Q9Y291 106 aaKnown RBP15.51■□□□□ 0.07
TRIM13-208ENST00000478111 AKAP6Q13023 2319 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 NCKAP5O14513 1909 aa15.51■□□□□ 0.07
TRIM13-208ENST00000478111 NIPBLQ6KC79 2804 aaeCLIP15.5■□□□□ 0.075e-7■■□□□ 13.4
TRIM13-208ENST00000478111 A0A088AWK7 358 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 NKX2-6A6NCS4 301 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 A8MVJ9 347 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 WWP2O00308 870 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 TOXO94900 526 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 GLSO94925 669 aaPredicted RBP15.5■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF10P21506 573 aaPredicted RBP15.5■□□□□ 0.07
TRIM13-208ENST00000478111 SOX3P41225 446 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 HK2P52789 917 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 MTTPP55157 894 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 RIPPLY3P57055 190 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 DOC2AQ14183 400 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 OR4D1Q15615 310 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 TMEM211Q6ICI0 200 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 TRIM40Q6P9F5 258 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 GPALPP1Q8IXQ4 340 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 TMEM132CQ8N3T6 1108 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 MORN4Q8NDC4 146 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 CHTF18Q8WVB6 975 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 ASB5Q8WWX0 329 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 SREK1Q8WXA9 508 aaKnown RBP15.5■□□□□ 0.07
TRIM13-208ENST00000478111 F2RL3Q96RI0 385 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 ALOXE3Q9BYJ1 711 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms