RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ADAP2Q9NPF8 381 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SACM1LQ9NTJ5 587 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 ALKBH4Q9NXW9 302 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 TUBA8Q9NY65 449 aaPredicted RBP18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 MTRF1LQ9UGC7 380 aaKnown RBP18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 MXRA5Q9NR99 2828 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 CTAGE15A4D2H0 777 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 TUBAL3A6NHL2 446 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 WWP2O00308 870 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 EPXP11678 715 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 CD53P19397 219 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 TPSB2P20231 275 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 SLC1A2P43004 574 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 DNASE1L1P49184 302 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 HK2P52789 917 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 SLC10A1Q14973 349 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 TPSAB1Q15661 275 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 PHKG1Q16816 387 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 CATSPEREQ5SY80 951 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 FAM47EQ6ZV65 393 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 CTAGE6Q86UF2 777 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 ULK2Q8IYT8 1036 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 OR56A3Q8NH54 315 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 PYCR2Q96C36 320 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 SGCZQ96LD1 299 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 EXO5Q9H790 373 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 HIVEP2P31629 2446 aa18.72■□□□□ 0.59
PDLIM1-202ENST00000477757 CLCA1A8K7I4 914 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 PCSK6P29122 969 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 HSD17B7P56937 341 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 REEP5Q00765 189 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 HSDL2Q6YN16 418 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 ANKRD53Q8N9V6 530 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 TRPV3Q8NET8 790 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 KLHL31Q9H511 634 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 ZNF703Q9H7S9 590 aaPredicted RBP18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 ATG4BQ9Y4P1 393 aa18.71■□□□□ 0.59
PDLIM1-202ENST00000477757 SYNDIG1LA6NDD5 238 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 CCL3P10147 92 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 CEACAM8P31997 349 aaPredicted RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 RGS4P49798 205 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 THOC5Q13769 683 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 DHX34Q14147 1143 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 ELAVL1Q15717 326 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 DUPD1Q68J44 220 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 POMZP3Q6PJE2 187 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 CXorf67Q86X51 503 aaPredicted RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 PALM2Q8IXS6 379 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 TMEM132CQ8N3T6 1108 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 LRRN4CLQ8ND94 238 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 EEF1AKMT1Q8WVE0 214 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 SLC5A11Q8WWX8 675 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 NEIL2Q969S2 332 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF669Q96BR6 464 aaPredicted RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 AICDAQ9GZX7 198 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 SEMA4BQ9NPR2 832 aaPredicted RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 PRTFDC1Q9NRG1 225 aa18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 TRMT1Q9NXH9 659 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF629Q9UEG4 869 aaPredicted RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 TRMT6Q9UJA5 497 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-202ENST00000477757 TCRBV7S3A2A0A539 114 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 P04436 131 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 HNRNPFP52597 415 aaKnown RBP18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 SORDQ00796 357 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 SLC13A2Q13183 592 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 CSHL1Q14406 222 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 TOR1AIP1Q5JTV8 583 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 Q5PR19 223 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 CASC4Q6P4E1 433 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 RAD9BQ6WBX8 426 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 MAATS1Q7Z4T9 603 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 KIF18BQ86Y91 864 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 MYO1HQ8N1T3 1032 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 TMEM52Q8NDY8 209 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 SREK1Q8WXA9 508 aaKnown RBP18.69■□□□□ 0.58
PDLIM1-202ENST00000477757 EML6Q6ZMW3 1958 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 RTTNQ86VV8 2226 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 CLDN4O14493 209 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 ARHGEF9O43307 516 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF354AO60765 605 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 SERPINA6P08185 405 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 HIST1H2AGP0C0S8 130 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 HIST1H2ADP20671 130 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 CCZ1BP86790 482 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 CCZ1P86791 482 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 BMPR2Q13873 1038 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 ACSF3Q4G176 576 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 DRICH1Q6PGQ1 229 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 OPN5Q6U736 354 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 KIAA1328Q86T90 577 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 LMNTD2Q8IXW0 634 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 OR8K3Q8NH51 312 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 HIST1H2AHQ96KK5 128 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 TSNARE1Q96NA8 513 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 HIST1H2AJQ99878 128 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 H2AFJQ9BTM1 129 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 PELI2Q9HAT8 420 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 ARL15Q9NXU5 204 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 CLCA3PQ9Y6N3 262 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms