RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 PGBD3Q8N328 593 aa12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 TTC29Q8NA56 475 aaPredicted RBP12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 Q96MT0 163 aa12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 SCML2Q9UQR0 700 aa12.16□□□□□ -0.46
RTFDC1-207ENST00000477573 GLYATL1P3A0A0U1RQE8 302 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 FAM221BA6H8Z2 402 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 OR6C74A6NCV1 312 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 H7C4K7 107 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 M0R233 179 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 RTCAO00442 366 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 PLA2G10O15496 165 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 CHP2O43745 196 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 GPX5O75715 221 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 IGLV3-25P01717 112 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 OR4Q2P0C623 313 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC6A2P23975 617 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 TMEM107Q6UX40 140 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 MON1AQ86VX9 555 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 CREB3L1Q96BA8 519 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 OTULINQ96BN8 352 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 KCNA7Q96RP8 456 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 NTMT1Q9BV86 223 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 CD244Q9BZW8 370 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 RNF208Q9H0X6 261 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 DDX31Q9H8H2 851 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 NMRAL1Q9HBL8 299 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 OLA1Q9NTK5 396 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 SMPD4Q9NXE4 827 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 HCN3Q9P1Z3 774 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 PCDHA9Q9Y5H5 950 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 BACE2Q9Y5Z0 518 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 TTC3P53804 2025 aa12.15□□□□□ -0.46
RTFDC1-207ENST00000477573 A0A1B0GVI7 797 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM72CH0Y354 149 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 IRAK2O43187 625 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 METTL18O95568 372 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM157BP0CG42 384 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 ERVK-10P10266 1014 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 LHCGRP22888 699 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 CD96P40200 585 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 EPHA4P54764 986 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 EEFSECP57772 596 aaKnown RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 MRPL58Q14197 206 aaKnown RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 GPNMBQ14956 572 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 PTCHD3Q3KNS1 767 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 THEM4Q5T1C6 240 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM72AQ5TYM5 149 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 KANK2Q63ZY3 851 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM72DQ6L9T8 149 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 CAPN13Q6MZZ7 669 aaPredicted RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM72BQ86X60 149 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 NAGSQ8N159 534 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 AVL9Q8NBF6 648 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 AKR7LQ8NHP1 331 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 GPR151Q8TDV0 419 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 CREB3L4Q8TEY5 395 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 NR4A3Q92570 626 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 LRRC46Q96FV0 321 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 NARS2Q96I59 477 aaKnown RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 COQ10AQ96MF6 247 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 MEAF6Q9HAF1 191 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 EIF2B3Q9NR50 452 aaKnown RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 DENND4AQ7Z401 1863 aa12.15□□□□□ -0.47
RTFDC1-207ENST00000477573 RHPN2P1A8MT19 583 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 FPGTO14772 594 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 ANKRD28O15084 1053 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 NPHS1O60500 1241 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM20BO75063 409 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 CFDP00746 253 aaPredicted RBP12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 MLNP12872 115 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 CCL5P13501 91 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 HDCP19113 662 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 FPR3P25089 353 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 HTR1EP28566 365 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 FMO3P31513 532 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 GSK3BP49841 420 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 PTPRRQ15256 657 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 LRRN4Q8WUT4 740 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC38A2Q96QD8 506 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC38A3Q99624 504 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 C1QTNF6Q9BXI9 259 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 MIXL1Q9H2W2 232 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 ZDHHC4Q9NPG8 344 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms