RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FAM173AQ9BQD7 235 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 AIF1LQ9BQI0 150 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM167BQ9BTA0 163 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 SGPP1Q9BX95 441 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 OR8D2Q9GZM6 311 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 COPS7BQ9H9Q2 264 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 PPANQ9NQ55 473 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 PLSCR2Q9NRY7 297 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 RASSF1Q9NS23 344 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 SACM1LQ9NTJ5 587 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 TAS2R13Q9NYV9 303 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 MRPS33Q9Y291 106 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 MED16Q9Y2X0 877 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 MMACHCQ9Y4U1 282 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 CLCA3PQ9Y6N3 262 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 KIAA1549Q9HCM3 1950 aa6.2□□□□□ -1.42
RTFDC1-206ENST00000477485 EXPH5Q8NEV8 1989 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 A0A088AWK7 358 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 IGKV3D-11A0A0A0MRZ8 115 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 TRGV5A0A0B4J1U4 118 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 MAGEB16A2A368 324 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 A6NNC1 897 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 C4orf51C9J302 202 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 DVL2O14641 736 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ERI3O43414 337 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 B3GALT2O43825 422 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 RAF1P04049 648 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF10P21506 573 aaPredicted RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 CNR1P21554 472 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 AHRP35869 848 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 SCTRP47872 440 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 TRPC1P48995 793 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 GPR143P51810 404 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 HNRNPFP52597 415 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 PGGT1BP53609 377 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 PLA2G16P53816 162 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 WNT3P56703 355 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 IL2P60568 153 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 KCNJ2P63252 427 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ADAM8P78325 824 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 REEP5Q00765 189 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 STX4Q12846 297 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC10A1Q14973 349 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 POU4F3Q15319 338 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 SIX1Q15475 284 aaPredicted RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 TERF2Q15554 542 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 RBM20Q5T481 1227 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 RTL6Q6ICC9 239 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 PAMR1Q6UXH9 720 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 CLEC9AQ6UXN8 241 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 FRA10AC1Q70Z53 315 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 BIVMQ86UB2 503 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 CAND1Q86VP6 1230 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 THOC6Q86W42 341 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 LMNTD2Q8IXW0 634 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 TMEM132CQ8N3T6 1108 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 RNF10Q8N5U6 811 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ANKRD53Q8N9V6 530 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 SPC24Q8NBT2 197 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ABHD11Q8NFV4 315 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 SCYL1Q96KG9 808 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 CAPZA3Q96KX2 299 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ALPK1Q96QP1 1244 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 OR4K3Q96R72 315 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 YIPF4Q9BSR8 244 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF395Q9H8N7 513 aaPredicted RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ZDHHC11Q9H8X9 412 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 IL1RL2Q9HB29 575 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 XAB2Q9HCS7 855 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ADAP2Q9NPF8 381 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 TUBA8Q9NY65 449 aaPredicted RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 MYOTQ9UBF9 498 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 B4GALT7Q9UBV7 327 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 COPS7AQ9UBW8 275 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF223Q9UK11 482 aaPredicted RBP6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 DOCK7Q96N67 2140 aa6.19□□□□□ -1.42
RTFDC1-206ENST00000477485 ABCA2Q9BZC7 2435 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 C15orf38-AP3S2A0A0A6YYH1 394 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ZCWPW2A0A1B0GU75 182 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CTAGE15A4D2H0 777 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TUBAL3A6NHL2 446 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 HSPB2A8KAH6 182 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 C17orf105B2RV13 164 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 EEF1E1-BLOC1S5C9J1V9 151 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TGFBR3LH3BV60 316 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 AQP7O14520 342 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CLGNO14967 610 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 EEF1E1O43324 174 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 H2AFYO75367 372 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 WDR47O94967 919 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 LRATO95237 230 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 INHBBP09529 407 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CCL3P10147 92 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 GABRA1P14867 456 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms