RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 CCND2P30279 289 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 MAP2K2P36507 400 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 SLC1A3P43003 542 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 MAGEA4P43358 317 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TNFSF10P50591 281 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 HERV-K104P61576 105 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 HERV-K104P63124 156 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 CCZ1BP86790 482 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 CCZ1P86791 482 aaPredicted RBP3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 GPR17Q13304 367 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 ITGA9Q13797 1035 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 EXT1Q16394 746 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 LRRC37A5PQ49AS3 106 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 CMPK2Q5EBM0 449 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TMEM26Q6ZUK4 368 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 G2E3Q7L622 706 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 SLC16A9Q7RTY1 509 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 SYVN1Q86TM6 617 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 SLC37A3Q8NCC5 494 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 SELENOMQ8WWX9 145 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 FCGR1BQ92637 280 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TAF15Q92804 592 aaKnown RBP eCLIP3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 BPIFA2Q96DR5 249 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 C14orf79Q96F83 325 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 CARD6Q9BX69 1037 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TEX13BQ9BXU2 312 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TRPV6Q9H1D0 765 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TMEM231Q9H6L2 316 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 EGLN3Q9H6Z9 239 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 COQ10BQ9H8M1 238 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 FAM212BQ9NTI7 297 aaPredicted RBP3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 EXOC1Q9NV70 894 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 TBC1D13Q9NVG8 400 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 AATFQ9NY61 560 aaKnown RBP eCLIP3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 POMT2Q9UKY4 750 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 ERVK-19Q9WJR5 959 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 UBE4BO95155 1302 aa3.95□□□□□ -1.78
SOX2-OT-207ENST00000476964 MLNRO43193 412 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 EXTL3O43909 919 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 DFFBO76075 338 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 AK1P00568 194 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 NGFP01138 241 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CALCAP01258 141 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 PROS1P07225 676 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ZNF883P0CG24 379 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 FAM157CP0CG43 387 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ODC1P11926 461 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 KRT3P12035 628 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 FUT1P19526 365 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CEACAM8P31997 349 aaPredicted RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 PRPHP41219 470 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ACAA2P42765 397 aaKnown RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CLCN4P51793 760 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 GEMP55040 296 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CDR2Q01850 454 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CEACAM7Q14002 265 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 TRIM29Q14134 588 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 P2RY6Q15077 328 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 SPHARQ15513 63 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 FGD3Q5JSP0 725 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 LYPLAL1Q5VWZ2 237 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 SLC27A4Q6P1M0 643 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 AFTPHQ6ULP2 937 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 TMEM99Q8N816 258 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 TCEANCQ8N8B7 351 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 DDHD1Q8NEL9 900 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 OR56B1Q8NGI3 324 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 OR13C5Q8NGS8 318 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 HCAR2Q8TDS4 363 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 TRIM44Q96DX7 344 aaPredicted RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ZNF274Q96GC6 653 aaPredicted RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 TAAR6Q96RI8 345 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 THUMPD2Q9BTF0 503 aaKnown RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ATG10Q9H0Y0 220 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 MARCH7Q9H992 704 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 HOMER3Q9NSC5 361 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 DDX28Q9NUL7 540 aaKnown RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 ACOXLQ9NUZ1 547 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 CNOT2Q9NZN8 540 aaKnown RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 FLRT3Q9NZU0 649 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 POLKQ9UBT6 870 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 NARFQ9UHQ1 456 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 MAN1B1Q9UKM7 699 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 PYGO1Q9Y3Y4 419 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 MYH14Q7Z406 1995 aaKnown RBP3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 STK36Q9NRP7 1315 aa3.94□□□□□ -1.78
SOX2-OT-207ENST00000476964 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 TRBV4-1A0A0J9YWV2 114 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 GLRA3O75311 464 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 ZFAND5O76080 213 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 CPNE6O95741 557 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 EPOP01588 193 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 EDN1P05305 212 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 PRKAR1AP10644 381 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 GNSP15586 552 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 CEBPBP17676 345 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 CYP3A5P20815 502 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 HLA-FP30511 346 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
SOX2-OT-207ENST00000476964 SSTP61278 116 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms