RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 DOCK10Q96BY6 2186 aa11.68□□□□□ -0.54
APTX-220ENST00000476858 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 URADA6NGE7 173 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 MANBAO00462 879 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 B3GALT2O43825 422 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 TYROBPO43914 113 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 UGDHO60701 494 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 LDB3O75112 727 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SCELO95171 688 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 IGHEP01854 428 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 PRR35P0CG20 571 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 CPA3P15088 417 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 HIST1H1TP22492 207 aaPredicted RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 GSTM2P28161 218 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SERPINB3P29508 390 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 PIK3CBP42338 1070 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SSR2P43308 183 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 RRADP55042 308 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 RAB38P57729 211 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SLAMF1Q13291 335 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 MYBPC3Q14896 1274 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 NSDHLQ15738 373 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 GGTA1PQ4G0N0 100 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 OR4C11Q6IEV9 310 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 DGAT2L6Q6ZPD8 337 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 ZCCHC23Q6ZST2 131 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 EXOC3L1Q86VI1 746 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SCUBE1Q8IWY4 988 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 CLEC1AQ8NC01 280 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 AGAP11Q8TF27 550 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SEC16BQ96JE7 1060 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 OR1F2PQ96R84 312 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 GATA5Q9BWX5 397 aaPredicted RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 ROPN1BQ9BZX4 212 aaPredicted RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 ROPN1Q9HAT0 212 aaPredicted RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 OXSMQ9NWU1 459 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 MKS1Q9NXB0 559 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 GRID1Q9ULK0 1009 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 ATG4BQ9Y4P1 393 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 PCDHGA9Q9Y5G4 932 aaKnown RBP11.67□□□□□ -0.54
APTX-220ENST00000476858 PCDHGA11Q9Y5H2 935 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 PTGDR2Q9Y5Y4 395 aa11.67□□□□□ -0.54
APTX-220ENST00000476858 A0A0A6YYD5 115 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 A0A1W2PR48 441 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TCRBV16S1A1N1A0A5B0 115 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 GLOD5A6NK44 160 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 EIF4E1BA6NMX2 242 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 B8ZZF3 427 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 PRMT3O60678 531 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 OTCP00480 354 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 CCT5P48643 541 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 PGDP52209 483 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 SOX8P57073 446 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 OR4D2P58180 307 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 SRSF11Q05519 484 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 GALNT1Q10472 559 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 TBL3Q12788 808 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 AIMP2Q13155 320 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 TMEM35AQ53FP2 167 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TNFAIP8L3Q5GJ75 292 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 CEP85LQ5SZL2 805 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 MRM1Q6IN84 353 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 PAPD4Q6PIY7 484 aaKnown RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 LINC00696Q6ZRV3 163 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 FRMD7Q6ZUT3 714 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 CHSY3Q70JA7 882 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 RIBC1Q8N443 379 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 ZNF321PQ8N8H1 164 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 CCDC63Q8NA47 563 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 Q8NA96 180 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 NFAM1Q8NET5 270 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 PPP4R1Q8TF05 950 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 ANKRD9Q96BM1 317 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 PKNOX2Q96KN3 472 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 MAGEB10Q96LZ2 347 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 KCNC2Q96PR1 638 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 EPN3Q9H201 632 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 ZNF395Q9H8N7 513 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TEX10Q9NXF1 929 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 PLA2G3Q9NZ20 509 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 PTGFRNQ9P2B2 879 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 TRPS1Q9UHF7 1281 aa11.66□□□□□ -0.54
APTX-220ENST00000476858 ZNF223Q9UK11 482 aaPredicted RBP11.66□□□□□ -0.54
APTX-220ENST00000476858 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms