RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-211ENST00000476772 BTNL2Q9UIR0 455 aa27.35■■□□□ 1.97
VEGFA-211ENST00000476772 PLCL2Q9UPR0 1127 aa27.35■■□□□ 1.97
VEGFA-211ENST00000476772 L3MBTL1Q9Y468 752 aa27.35■■□□□ 1.97
VEGFA-211ENST00000476772 ATG4BQ9Y4P1 393 aa27.35■■□□□ 1.97
VEGFA-211ENST00000476772 PCDHB14Q9Y5E9 798 aa27.35■■□□□ 1.97
VEGFA-211ENST00000476772 LNP1A1A4G5 178 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 RNASET2O00584 256 aaKnown RBP27.34■■□□□ 1.97
VEGFA-211ENST00000476772 TBX19O60806 448 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 CPSF4O95639 269 aaKnown RBP27.34■■□□□ 1.97
VEGFA-211ENST00000476772 SEPHS1P49903 392 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 SELPLGQ14242 412 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 VPS37AQ8NEZ2 397 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 CCDC115Q96NT0 180 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 ANKRD27Q96NW4 1050 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 SERINC2Q96SA4 455 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 LYARQ9NX58 379 aaKnown RBP27.34■■□□□ 1.97
VEGFA-211ENST00000476772 C5AR2Q9P296 337 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 ATXN7L1Q9ULK2 861 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-211ENST00000476772 ERVK-11Q9UQG0 969 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 UNC13CQ8NB66 2214 aa27.34■■□□□ 1.97
VEGFA-211ENST00000476772 A0A1W2PR48 441 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 PRKRAO75569 313 aaKnown RBP27.33■■□□□ 1.97
VEGFA-211ENST00000476772 ANP32DO95626 131 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 TRPC1P48995 793 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 MTPNP58546 118 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 DAB2P98082 770 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 PRTGQ2VWP7 1150 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 C6orf163Q5TEZ5 329 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 PRSS41Q7RTY9 318 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 FAM47BQ8NA70 645 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 MAPKAP1Q9BPZ7 522 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 FAIM2Q9BWQ8 316 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 SEMA5BQ9P283 1151 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 MGRN1O60291 552 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 GUCY1B2O75343 617 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 ZNF883P0CG24 379 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 CKMT1AP12532 417 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 DRD2P14416 443 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 IL1RNP18510 177 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 HNRNPFP52597 415 aaKnown RBP27.33■■□□□ 1.97
VEGFA-211ENST00000476772 CCL7P80098 99 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 KCNAB1Q14722 419 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 RUNDC3AQ59EK9 446 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 FBXW10Q5XX13 1052 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 FAM180BQ6P0A1 224 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 PRR23CQ6ZRP0 262 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 PRSS42Q7Z5A4 293 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 C10orf67Q8IYJ2 551 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 ARHGEF39Q8N4T4 335 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 OR8J3Q8NGG0 315 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 ZNF285Q96NJ3 590 aa27.33■■□□□ 1.97
VEGFA-211ENST00000476772 A0A1W2PQM1 296 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 A8MU76 341 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 TXNDC9O14530 226 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 ENTPD5O75356 428 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 AIFM1O95831 613 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 RPLP0P05388 317 aaKnown RBP27.32■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF10P21506 573 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-211ENST00000476772 HSD11B2P80365 405 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 SQSTM1Q13501 440 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 TMPRSS9Q7Z410 1059 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 IFI44Q8TCB0 444 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 GBP5Q96PP8 586 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 SLC22A7Q9Y694 548 aa27.32■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF860A6NHJ4 632 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 B3GALT2O43825 422 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 ARL4DP49703 201 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 C18orf63Q68DL7 685 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 TMEM71Q6P5X7 295 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 PDSS2Q86YH6 399 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 KLHL6Q8WZ60 621 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 EXOSC8Q96B26 276 aaKnown RBP27.31■■□□□ 1.96
VEGFA-211ENST00000476772 AURKBQ96GD4 344 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF764Q96H86 408 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-211ENST00000476772 IKZF5Q9H5V7 419 aa27.31■■□□□ 1.96
VEGFA-211ENST00000476772 SUCOQ9UBS9 1254 aaKnown RBP27.31■■□□□ 1.96
VEGFA-211ENST00000476772 PROM1O43490 865 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 DNAJB6O75190 326 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 C6orf47O95873 294 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 ACTR3P61158 418 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 MS4A2Q01362 244 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 LRRC74AQ0VAA2 488 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 RUNX2Q13950 521 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 OR4A15Q8NGL6 344 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 CPPED1Q9BRF8 314 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 LRRN3Q9H3W5 708 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 DNAAF2Q9NVR5 837 aaKnown RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 EHD3Q9NZN3 535 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 NAALAD2Q9Y3Q0 740 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 GLOD5A6NK44 160 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 GALR3O60755 368 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 DDX5P17844 614 aaKnown RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 ERFP50548 548 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 OLR1P78380 273 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 LIPEQ05469 1076 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF574Q6ZN55 896 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF621Q6ZSS3 439 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 N4BP2L2Q92802 583 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-211ENST00000476772 SLC41A2Q96JW4 573 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms