RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 PCDHGB6Q9Y5F9 930 aa15.19■□□□□ 0.02
COL1A1-205ENST00000476387 CREBBPQ92793 2442 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 RASAL1O95294 804 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 F10P00742 488 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 EEF1DP29692 281 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MTTPP55157 894 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 RAB38P57729 211 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 PHEXP78562 749 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 PCDH1Q08174 1060 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 DDX39BQ13838 428 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 TMEM35AQ53FP2 167 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 ACER2Q5QJU3 275 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 LIPJQ5W064 366 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 ABHD17CQ6PCB6 329 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 GOLGA7Q7Z5G4 137 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 LAS2Q8IYD9 372 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 CYP4X1Q8N118 509 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 OR7G3Q8NG95 312 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF473Q8WTR7 871 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 RELTQ969Z4 430 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 REPS1Q96D71 796 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 PHF21BQ96EK2 531 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 CMTM7Q96FZ5 175 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 F2RL3Q96RI0 385 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 SERINC2Q96SA4 455 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MS4A8Q9BY19 250 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 ROGDIQ9GZN7 287 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MRPL46Q9H2W6 279 aaKnown RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MMP25Q9NPA2 562 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 PSMC3IPQ9P2W1 217 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-205ENST00000476387 ADGRE2Q9UHX3 823 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 MMACHCQ9Y4U1 282 aa15.18■□□□□ 0.02
COL1A1-205ENST00000476387 LRRC14BA6NHZ5 514 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 A8MUI8 341 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 UGDHO60701 494 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-205ENST00000476387 TBX6O95947 436 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-205ENST00000476387 MAOAP21397 527 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 CERS1P27544 350 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 COL8A1P27658 744 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 TAS2R50P59544 299 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 BTG2P78543 158 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 RUNX2Q13950 521 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 ZRSR2Q15696 482 aaKnown RBP15.17■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.17■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF787Q6DD87 383 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 ADGRD1Q6QNK2 874 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 CHSY3Q70JA7 882 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 SLC34A3Q8N130 599 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 LGI4Q8N135 537 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 FAM47BQ8NA70 645 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 ATP6V1E2Q96A05 226 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 QRFPRQ96P65 431 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 TXLNGYQ9BZA5 131 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 IPPKQ9H8X2 491 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 KCNK13Q9HB14 408 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 FETUBQ9UGM5 382 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 PCDHGA11Q9Y5H2 935 aa15.17■□□□□ 0.02
COL1A1-205ENST00000476387 TCRBV16S1A1N1A0A5B0 115 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 FAM227AF5H4B4 570 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 CLDN4O14493 209 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 CDK2AP1O14519 115 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 STX16O14662 325 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 SH3BGRLO75368 114 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 TGFB1P01137 390 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 GCAP28676 217 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 PIK3CBP42338 1070 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 SSR2P43308 183 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 CCNG1P51959 295 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 RAP1GDS1P52306 607 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 KCNK10P57789 538 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 SLC26A5P58743 744 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 MEP1AQ16819 746 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 AP5B1Q2VPB7 878 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 ZNF766Q5HY98 468 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 GFRALQ6UXV0 394 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 TIFABQ6ZNK6 161 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 BEST3Q8N1M1 668 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 SLC5A8Q8N695 610 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 AMER2Q8N7J2 671 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 UBLCP1Q8WVY7 318 aaPredicted RBP15.16■□□□□ 0.02
COL1A1-205ENST00000476387 TBCDQ9BTW9 1192 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 DMRT3Q9NQL9 472 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 PRTFDC1Q9NRG1 225 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 CROCCQ5TZA2 2017 aa15.16■□□□□ 0.02
COL1A1-205ENST00000476387 IGKV3D-11A0A0A0MRZ8 115 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 SAGE2PA6NJ88 616 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 ZG16O60844 167 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 MST1P26927 711 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 TNFRSF8P28908 595 aa15.15■□□□□ 0.02
COL1A1-205ENST00000476387 LIM2P55344 173 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms