RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 GAGE12GP0CL81 117 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 GAGE12IP0CL82 117 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 IGHV4-30-4P0DP06 118 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ANPEPP15144 967 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CYP3A5P20815 502 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CCR1P32246 355 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CA8P35219 290 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RGS4P49798 205 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 MLLT10P55197 1068 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CBX1P83916 185 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ZXDBP98169 803 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 GAGE1Q13065 139 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 GAGE4Q13068 117 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 DHX34Q14147 1143 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 OPCMLQ14982 345 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 EFTUD2Q15029 972 aaKnown RBP eCLIP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 SPHARQ15513 63 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ITPRIPL2Q3MIP1 535 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 POM121L1PQ3SYA9 428 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 C1orf185Q5T7R7 199 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 C20orf194Q5TEA3 1177 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ATF7IP2Q5U623 682 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 LYPLAL1Q5VWZ2 237 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RTL6Q6ICC9 239 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ASPHD2Q6ICH7 369 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 SNRNP48Q6IEG0 339 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 PACS1Q6VY07 963 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 TECPR1Q7Z6L1 1165 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 FJX1Q86VR8 437 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 PHC2Q8IXK0 858 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RNF113BQ8IZP6 322 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 PRR26Q8N8Z3 221 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 LRTM2Q8N967 370 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 FAM184AQ8NB25 1140 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CCDC148Q8NFR7 591 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 NTN5Q8WTR8 489 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ANKRD49Q8WVL7 239 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 TMEM45BQ96B21 275 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 MRPL53Q96EL3 112 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RAB40CQ96S21 281 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 KRT12Q99456 494 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 MAP3K3Q99759 626 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 SF3B5Q9BWJ5 86 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 GPR61Q9BZJ8 451 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 THAP2Q9H0W7 228 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 TMPRSS5Q9H3S3 457 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CLSTN2Q9H4D0 955 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 C5orf66Q9H5L9 145 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 METTL7AQ9H8H3 244 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 EVA1AQ9H8M9 152 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 PCDH9Q9HC56 1237 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 CHST11Q9NPF2 352 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RPRD1BQ9NQG5 326 aaKnown RBP3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ETNK2Q9NVF9 386 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RNF186Q9NXI6 227 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 RNF14Q9UBS8 474 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 STUB1Q9UNE7 303 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 OR2W1Q9Y3N9 320 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 ETV7Q9Y603 341 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 PTCH1Q13635 1447 aa3.84□□□□□ -1.79
VPS13D-207ENST00000476169 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 H0YIV9 168 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 EXTL3O43909 919 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 KCNJ13O60928 360 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 WDR1O75083 606 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 RHBDL1O75783 438 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 TM7SF2O76062 418 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 EPOP01588 193 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 HIST1H2AGP0C0S8 130 aaPredicted RBP3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ODC1P11926 461 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 LHCGRP22888 699 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 DPP4P27487 766 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 HTR2AP28223 471 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 CSTF2P33240 577 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS13D-207ENST00000476169 DUTP33316 252 aaKnown RBP3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ACADSBP45954 432 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PEX5P50542 639 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 CNTN2Q02246 1040 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 Q0VFX4 171 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 TAF10Q12962 218 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 MFAP5Q13361 173 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF234Q14588 700 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 TMEM132DQ14C87 1099 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ANKRD55Q3KP44 614 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PHYHD1Q5SRE7 291 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PRAMEF20Q5VT98 475 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 LINGO4Q6UY18 593 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 C17orf107Q6ZR85 190 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ODF3L1Q8IXM7 274 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 GPALPP1Q8IXQ4 340 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 EID3Q8N140 333 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 UBE2J2Q8N2K1 259 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 SLC43A2Q8N370 569 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 CLIP4Q8N3C7 705 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 DNAJC22Q8N4W6 341 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 NECAB1Q8N987 351 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 CCDC197Q8NCU1 140 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 OR6M1Q8NGM8 313 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 OR4L1Q8NH43 312 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms