RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MCHR1Q99705 422 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 SLC29A3Q9BZD2 475 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 LMO7Q8WWI1 1683 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 E2F3O00716 465 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 DLDP09622 509 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 GLDCP23378 1020 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 RGS19P49795 217 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 SWT1Q5T5J6 900 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 IL22RA1Q8N6P7 574 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 DPAGT1Q9H3H5 408 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 SPATA6Q9NWH7 488 aaPredicted RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 NPIPA2E9PIF3 369 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 NPIPA3F8WFD2 350 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PFKLP17858 780 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 SCNN1AP37088 669 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 MAGEA2P43356 314 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 NUP43Q8NFH3 380 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 GNPDA2Q8TDQ7 276 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 P2RY13Q9BPV8 354 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PAAF1Q9BRP4 392 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 POLDIP3Q9BY77 421 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 RGPD2P0DJD1 1756 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 C2orf78A6NCI8 922 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 C2orf74A8MZ97 194 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ZSCAN4Q8NAM6 433 aaPredicted RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 ZNF285Q96NJ3 590 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 SPHK2Q9NRA0 654 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ACSL5Q9ULC5 683 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 CMAHPQ9Y471 501 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 CROCCQ5TZA2 2017 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 MEN1O00255 615 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 GRPRP30550 384 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PTGR1Q14914 329 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 PDSS1Q5T2R2 415 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 RAB12Q6IQ22 244 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ZNF517Q6ZMY9 492 aaPredicted RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 DPY19L3Q6ZPD9 716 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 OR5J2Q8NH18 312 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 TIGARQ9NQ88 270 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 CSF2P04141 144 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ZNF12P17014 697 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 S100A2P29034 98 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 DIO3P55073 304 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 POU6F2P78424 691 aaPredicted RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 ATXN7L3Q14CW9 347 aaPredicted RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 KIAA1614Q5VZ46 1190 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ERN2Q76MJ5 926 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 IL17FQ96PD4 163 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ARFGEF2Q9Y6D5 1785 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 TRIM64BA6NI03 449 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SOCS2O14508 198 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 LATO43561 262 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 AOC1P19801 751 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SLC6A6P31641 620 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 HERV-K104P61576 105 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SLC36A4Q6YBV0 504 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ZNF761Q86XN6 746 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 UBQLNLQ8IYU4 475 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ZNF283Q8N7M2 679 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 BOLLQ8N9W6 283 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 OR51A7Q8NH64 312 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 TAS2R10Q9NYW0 307 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 GLS2Q9UI32 602 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 OR1A2Q9Y585 309 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 FAM221BA6H8Z2 402 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 CPNE6O95741 557 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 F2P00734 622 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SNU13P55769 128 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 KCNC4Q03721 635 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 CARM1Q86X55 608 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 LAS2Q8IYD9 372 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 Q9Y3F1 56 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 C8BP07358 591 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ACADVLP49748 655 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 E2F1Q01094 437 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 PIGFQ07326 219 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ZBED5Q49AG3 693 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 DEFB134Q4QY38 66 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 VTCN1Q7Z7D3 282 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 NLGN4YQ8NFZ3 816 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 PLEKHO2Q8TD55 490 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ZC3H10Q96K80 434 aaKnown RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 SCGB3A2Q96PL1 93 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SOX17Q9H6I2 414 aaPredicted RBP10.55□□□□□ -0.72
VAPB-204ENST00000475243 POU2F3Q9UKI9 436 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SARDHQ9UL12 918 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 PCDHGB2Q9Y5G2 931 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 EVPLQ92817 2033 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 SYNGR4O95473 234 aa10.55□□□□□ -0.72
VAPB-204ENST00000475243 PVALBP20472 110 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms