RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TMEM102Q8N9M5 508 aaPredicted RBP11.7□□□□□ -0.54
DDX56-209ENST00000473924 FAM47BQ8NA70 645 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CLEC1AQ8NC01 280 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 C8orf44Q96CB5 159 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 PTCHD1Q96NR3 888 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 LYRM4Q9HD34 91 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 VPS29Q9UBQ0 182 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 C19orf25Q9UFG5 118 aaPredicted RBP11.7□□□□□ -0.54
DDX56-209ENST00000473924 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ERVH48-1M5A8F1 160 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SOCS6O14544 535 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SCELO95171 688 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 HSPA4LO95757 839 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 GBAP04062 536 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SERPINE1P05121 402 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 KLK1P06870 262 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 CHRNGP07510 517 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 DHRS4L1P0CG22 281 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 CPN2P22792 545 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 BSGP35613 385 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SLC18A1P54219 525 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 EEF1A2Q05639 463 aaKnown RBP11.69□□□□□ -0.54
DDX56-209ENST00000473924 GALNT1Q10472 559 aaPredicted RBP11.69□□□□□ -0.54
DDX56-209ENST00000473924 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 TTMPQ5BVD1 217 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SPDYAQ5MJ70 313 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 SH2D4BQ5SQS7 431 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 CCNYL2Q5T2Q4 361 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 KIRREL2Q6UWL6 708 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 HOMEZQ8IX15 550 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 METTL4Q8N3J2 472 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
DDX56-209ENST00000473924 AGR3Q8TD06 166 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 MAPKAP1Q9BPZ7 522 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 ACPTQ9BZG2 426 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 ING2Q9H160 280 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 DDX31Q9H8H2 851 aaKnown RBP11.69□□□□□ -0.54
DDX56-209ENST00000473924 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 LYARQ9NX58 379 aaKnown RBP11.69□□□□□ -0.54
DDX56-209ENST00000473924 MS4A12Q9NXJ0 267 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 PHF11Q9UIL8 331 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 FBXL4Q9UKA2 621 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 CFAP47Q6ZTR5 3102 aa11.69□□□□□ -0.54
DDX56-209ENST00000473924 NUP210LQ5VU65 1888 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 HMGB1P1B2RPK0 211 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 TMEM114B3SHH9 223 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 EEDO75530 441 aaKnown RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 SASH3O75995 380 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 FAM58BPP0C7Q3 252 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 CHN1P15882 459 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 MAOAP21397 527 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 BGNP21810 368 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 GRK2P25098 689 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 TLX1P31314 330 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 BUD31P41223 144 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 CCL11P51671 97 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 POLE2P56282 527 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 HSD17B7P56937 341 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 BTG2P78543 158 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 HMGCS1Q01581 520 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 RHAGQ02094 409 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 BTKQ06187 659 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 ACTN3Q08043 901 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 SLC13A2Q13183 592 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 DCAF10Q5QP82 559 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 CPZQ66K79 652 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 TMEM205Q6UW68 189 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 LANCL3Q6ZV70 420 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 COMMD6Q7Z4G1 85 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 ANKRD37Q7Z713 158 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 GPR180Q86V85 440 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 APLFQ8IW19 511 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 ZNF595Q8IYB9 648 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 CLYBLQ8N0X4 340 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 PLPP5Q8NEB5 264 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 OR11G2Q8NGC1 345 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 TTC9Q92623 222 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 CSF3RQ99062 836 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 SH3GL2Q99962 352 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 ZNF717Q9BY31 904 aaPredicted RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 WDR41Q9HAD4 459 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 ATP13A2Q9NQ11 1180 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 KCMF1Q9P0J7 381 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 ADAM29Q9UKF5 820 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 G3BP2Q9UN86 482 aaKnown RBP11.68□□□□□ -0.54
DDX56-209ENST00000473924 TRAF6Q9Y4K3 522 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 MMACHCQ9Y4U1 282 aa11.68□□□□□ -0.54
DDX56-209ENST00000473924 A0A0A6YYD5 115 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 SERTM1A2A2V5 107 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 BLACEA4D250 179 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 MKRN2OSH3BPM6 223 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 CYR61O00622 381 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 RGS14O43566 566 aa11.67□□□□□ -0.54
DDX56-209ENST00000473924 TMPRSS11DO60235 418 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms