RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SUPT7LO94864 414 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 OTCP00480 354 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 RAP1GDS1P52306 607 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 PRKAA2P54646 552 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 MLLT10P55197 1068 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 CLCQ05315 142 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 ISLR2Q6UXK2 745 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 MILR1Q7Z6M3 343 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 L3HYPDHQ96EM0 354 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 ROGDIQ9GZN7 287 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 LYRM4Q9HD34 91 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 PRTFDC1Q9NRG1 225 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 RAB21Q9UL25 225 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 MMACHCQ9Y4U1 282 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 FOXE1O00358 373 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PLIN3O60664 434 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 EEDO75530 441 aaKnown RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 OR4F21O95013 312 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 KRT4P19013 534 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 IMPDH1P20839 514 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PPP2R1BP30154 601 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 CRHR1P34998 444 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 SLC26A5P58743 744 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PHEXP78562 749 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 SLC18A2Q05940 514 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 ACTN3Q08043 901 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 MFAP5Q13361 173 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 AP5B1Q2VPB7 878 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PLEKHN1Q494U1 663 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PRR30Q53SZ7 412 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 CRB2Q5IJ48 1285 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 FRG2Q64ET8 278 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 OR4C11Q6IEV9 310 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 ZYG11AQ6WRX3 759 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 CLNKQ7Z7G1 428 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 RIBC1Q8N443 379 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 MREGQ8N565 214 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 ADAMTS18Q8TE60 1221 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 PNPLA2Q96AD5 504 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 RGMAQ96B86 450 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 FRG2BQ96QU4 278 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 LPAR4Q99677 370 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 FARSBQ9NSD9 589 aaKnown RBP17.75■□□□□ 0.43
PTCD3-210ENST00000473829 LGALS13Q9UHV8 139 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 TENM4Q6N022 2769 aa17.75■□□□□ 0.43
PTCD3-210ENST00000473829 RELNP78509 3460 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 A8MUA0 341 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 ICAM2P13598 275 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 PTX3P26022 381 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-210ENST00000473829 BSGP35613 385 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 HSD17B7P56937 341 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 CUL3Q13618 768 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 TCHHL1Q5QJ38 904 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-210ENST00000473829 FCRLBQ6BAA4 426 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 TTC19Q6DKK2 380 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-210ENST00000473829 Q6ZS92 163 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 TRABD2AQ86V40 505 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 SLC22A9Q8IVM8 553 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 ZNF595Q8IYB9 648 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 ZADH2Q8N4Q0 377 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 PPP4R1Q8TF05 950 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 TM9SF4Q92544 642 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 MAGEB10Q96LZ2 347 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-210ENST00000473829 GSTO2Q9H4Y5 243 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 EPS8L2Q9H6S3 715 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 TRPS1Q9UHF7 1281 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 FBXW2Q9UKT8 454 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 PPT2Q9UMR5 302 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 PLAAQ9Y263 795 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 B3GNT3Q9Y2A9 372 aa17.74■□□□□ 0.43
PTCD3-210ENST00000473829 A0A0A6YYD5 115 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 MYOCOSA0A1B0GUC4 107 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 SAGE2PA6NJ88 616 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 COPEO14579 308 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 TMPRSS11DO60235 418 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 MYL2P10916 166 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 TSFMP43897 325 aaKnown RBP17.73■□□□□ 0.43
PTCD3-210ENST00000473829 HNRNPH2P55795 449 aaKnown RBP17.73■□□□□ 0.43
PTCD3-210ENST00000473829 IFFO1Q0D2I5 559 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 SLC13A2Q13183 592 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 SLAMF1Q13291 335 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 IGFBP7Q16270 282 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 EXT1Q16394 746 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 SGO1Q5FBB7 561 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 CUZD1Q86UP6 607 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 ZCCHC7Q8N3Z6 543 aaKnown RBP17.73■□□□□ 0.43
PTCD3-210ENST00000473829 KIF2BQ8N4N8 673 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 NFAM1Q8NET5 270 aaPredicted RBP17.73■□□□□ 0.43
PTCD3-210ENST00000473829 M1APQ8TC57 530 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 ZNF382Q96SR6 550 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 HBEGFQ99075 208 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 NPAS2Q99743 824 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 MMP25Q9NPA2 562 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 PSD3Q9NYI0 1048 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 PLA2G3Q9NZ20 509 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 GRID1Q9ULK0 1009 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 MRPS33Q9Y291 106 aaKnown RBP17.73■□□□□ 0.43
PTCD3-210ENST00000473829 BAHCC1Q9P281 2608 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 SHANK1Q9Y566 2161 aa17.73■□□□□ 0.43
PTCD3-210ENST00000473829 CNTRLQ7Z7A1 2325 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms