RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CCDC77Q9BR77 488 aa14.61□□□□□ -0.07
MRPL55-226ENST00000473066 DEFB126Q9BYW3 111 aa14.61□□□□□ -0.07
MRPL55-226ENST00000473066 LYRM4Q9HD34 91 aa14.61□□□□□ -0.07
MRPL55-226ENST00000473066 ADAP2Q9NPF8 381 aa14.61□□□□□ -0.07
MRPL55-226ENST00000473066 PNO1Q9NRX1 252 aaKnown RBP14.61□□□□□ -0.07
MRPL55-226ENST00000473066 IQANK1A0A1B0GTG1 560 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 BLACEA4D250 179 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 LRRC14BA6NHZ5 514 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 GABRR3A8MPY1 467 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 STX16-NPEPL1H3BU86 382 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 FCHO1O14526 889 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 STX16O14662 325 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 RIPK2O43353 540 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 MYO1DO94832 1006 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 RASAL1O95294 804 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 SIX3O95343 332 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 TBX6O95947 436 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CRYABP02511 175 aaKnown RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 IFNA16P05015 189 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 EDN3P14138 238 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 PIK3CBP42338 1070 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CLCN2P51788 898 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CCNG1P51959 295 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 STX4Q12846 297 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 TERF2Q15554 542 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CPSF6Q16630 551 aaKnown RBP eCLIP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 TEX35Q5T0J7 233 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CLNKQ7Z7G1 428 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 RPS19BP1Q86WX3 136 aaKnown RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 ACOT4Q8N9L9 421 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 FAM98AQ8NCA5 519 aaKnown RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 HUS1BQ8NHY5 278 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 ELP5Q8TE02 316 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 RGMAQ96B86 450 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 VMP1Q96GC9 406 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 CSF3RQ99062 836 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 MRPL57Q9BQC6 102 aaKnown RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 MRPL46Q9H2W6 279 aaKnown RBP14.6□□□□□ -0.07
MRPL55-226ENST00000473066 DMRT3Q9NQL9 472 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 ZNF358Q9NW07 568 aa14.6□□□□□ -0.07
MRPL55-226ENST00000473066 FLNBO75369 2602 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 TRBV11-1A0A0K0K1C0 115 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 SAP18O00422 153 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 RTCAO00442 366 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 CLDN9O95484 217 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 CBX6O95503 412 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 CD46P15529 392 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 HIST1H1TP22492 207 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 CPN2P22792 545 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 ATP5A1P25705 553 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 DEPDC1Q5TB30 811 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 TTC19Q6DKK2 380 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 TMEM132CQ8N3T6 1108 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 KIF2BQ8N4N8 673 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 AMER2Q8N7J2 671 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 TMEM178AQ8NBL3 297 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 C7orf57Q8NEG2 295 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 B3GNT7Q8NFL0 401 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 SSC4DQ8WTU2 575 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 MTERF1Q99551 399 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 BARD1Q99728 777 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 OR51B5Q9H339 312 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 CDCP1Q9H5V8 836 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 NOL11Q9H8H0 719 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 PRDM7Q9NQW5 492 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 PSMC3IPQ9P2W1 217 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 PHF11Q9UIL8 331 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 FBXW2Q9UKT8 454 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 TSC22D4Q9Y3Q8 395 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 LRRK2Q5S007 2527 aa14.59□□□□□ -0.07
MRPL55-226ENST00000473066 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
MRPL55-226ENST00000473066 H0YIV9 168 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 E2F3O00716 465 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 CDK2AP1O14519 115 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 SCELO95171 688 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 COX7A2P14406 83 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 TAC1P20366 129 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 PTX3P26022 381 aaPredicted RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 TLX1P31314 330 aaPredicted RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 HNRNPFP52597 415 aaKnown RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 TUBA3CQ13748 450 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 SERTAD2Q14140 314 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 OR1C1Q15619 314 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 ELAVL1Q15717 326 aaKnown RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 OR4C11Q6IEV9 310 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 TUBA3EQ6PEY2 450 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 ZNF793Q6ZN11 406 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 TMEM52Q8NDY8 209 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 NR4A3Q92570 626 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 DAZLQ92904 295 aaKnown RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 MAPKAP1Q9BPZ7 522 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 MS4A12Q9NXJ0 267 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 ANKRD10Q9NXR5 420 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 PCTPQ9UKL6 214 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 CLCA3PQ9Y6N3 262 aa14.58□□□□□ -0.08
MRPL55-226ENST00000473066 DIDO1Q9BTC0 2240 aaKnown RBP14.58□□□□□ -0.08
MRPL55-226ENST00000473066 CYR61O00622 381 aa14.57□□□□□ -0.08
MRPL55-226ENST00000473066 DYRK3O43781 588 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms