RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TMEM205Q6UW68 189 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 APLFQ8IW19 511 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 METTL4Q8N3J2 472 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 PAIP2Q9BPZ3 127 aaKnown RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 SORBS1Q9BX66 1292 aaKnown RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 RBCK1Q9BYM8 510 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 TNFRSF12AQ9NP84 129 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 MS4A12Q9NXJ0 267 aa19.58■□□□□ 0.72
TOP3A-204ENST00000472959 C19orf25Q9UFG5 118 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-204ENST00000472959 LOC102723996A0A087X1L8 192 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 A0A0A6YYD5 115 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 BLACEA4D250 179 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 TMEM114B3SHH9 223 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 FAM227AF5H4B4 570 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CYR61O00622 381 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CLDN4O14493 209 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 PRMT3O60678 531 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CDC123O75794 336 aaPredicted RBP19.57■□□□□ 0.72
TOP3A-204ENST00000472959 SASH3O75995 380 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CHEK2O96017 543 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CHRNGP07510 517 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 HTR6P50406 440 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 WDR4P57081 412 aaKnown RBP19.57■□□□□ 0.72
TOP3A-204ENST00000472959 TTMPQ5BVD1 217 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CYP20A1Q6UW02 462 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 QSOX2Q6ZRP7 698 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 TRIM46Q7Z4K8 759 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 ZNF595Q8IYB9 648 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 CLYBLQ8N0X4 340 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 OR11G2Q8NGC1 345 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 TTC9Q92623 222 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 EXTL1Q92935 676 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 HBEGFQ99075 208 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 MAPKAP1Q9BPZ7 522 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 MRPL1Q9BYD6 325 aaKnown RBP19.57■□□□□ 0.72
TOP3A-204ENST00000472959 ACPTQ9BZG2 426 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 MLXIPLQ9NP71 852 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 PRDM9Q9NQV7 894 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 LYARQ9NX58 379 aaKnown RBP19.57■□□□□ 0.72
TOP3A-204ENST00000472959 PHF11Q9UIL8 331 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 TRAF6Q9Y4K3 522 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 MMACHCQ9Y4U1 282 aa19.57■□□□□ 0.72
TOP3A-204ENST00000472959 SCN3AQ9NY46 2000 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 KMT2BQ9UMN6 2715 aaPredicted RBP19.56■□□□□ 0.72
TOP3A-204ENST00000472959 ARGFXA6NJG6 315 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 ERVH48-1M5A8F1 160 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 EEDO75530 441 aaKnown RBP19.56■□□□□ 0.72
TOP3A-204ENST00000472959 SERPINB3P29508 390 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 HSD17B7P56937 341 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 TBL3Q12788 808 aaKnown RBP19.56■□□□□ 0.72
TOP3A-204ENST00000472959 NSDHLQ15738 373 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 DCAF10Q5QP82 559 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 KANK2Q63ZY3 851 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 CLEC6AQ6EIG7 209 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 MRM1Q6IN84 353 aaKnown RBP19.56■□□□□ 0.72
TOP3A-204ENST00000472959 RNF165Q6ZSG1 346 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 GPR180Q86V85 440 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 ING2Q9H160 280 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 FBXL4Q9UKA2 621 aa19.56■□□□□ 0.72
TOP3A-204ENST00000472959 ARHGAP10A1A4S6 786 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 HSPA4LO95757 839 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 KLK1P06870 262 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 FAM58BPP0C7Q3 252 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 CPN2P22792 545 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 TLX1P31314 330 aaPredicted RBP19.55■□□□□ 0.72
TOP3A-204ENST00000472959 EFNA3P52797 238 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 FAM219BQ5XKK7 198 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 FAAH2Q6GMR7 532 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 NDUFAF7Q7L592 441 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 COMMD6Q7Z4G1 85 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 CLEC1AQ8NC01 280 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 MGARPQ8TDB4 240 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 CHTF18Q8WVB6 975 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 WBP1Q96G27 269 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 PTCHD1Q96NR3 888 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 ARHGAP9Q9BRR9 750 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 PRTFDC1Q9NRG1 225 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 ZNF446Q9NWS9 450 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 FBXW2Q9UKT8 454 aa19.55■□□□□ 0.72
TOP3A-204ENST00000472959 SYNDIG1LA6NDD5 238 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 OR2W5A6NFC9 320 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 TMPRSS11DO60235 418 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 HPP00738 406 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 CHN1P15882 459 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 BGNP21810 368 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ARRB2P32121 409 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ABCE1P61221 599 aaKnown RBP19.54■□□□□ 0.72
TOP3A-204ENST00000472959 BTG2P78543 158 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 STX3Q13277 289 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 IMPG1Q17R60 797 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 LINC00303Q3SY05 128 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 SPIN4Q56A73 249 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 SH2D4BQ5SQS7 431 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 CCNYL2Q5T2Q4 361 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 SCIMPQ6UWF3 145 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 CPEB2Q7Z5Q1 589 aaKnown RBP19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ANKRD37Q7Z713 158 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 TRIM42Q8IWZ5 723 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 KIRREL3Q8IZU9 778 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 FAM47BQ8NA70 645 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms