RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TNNT1P13805 278 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 EZRP15311 586 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 CD1EP15812 388 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 PECAM1P16284 738 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 MAGP20916 626 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 FBLP22087 321 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 HRH2P25021 359 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 PSMB4P28070 264 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ATP5DP30049 168 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CMPK1P30085 196 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CTNNA1P35221 906 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 ADRA1AP35348 466 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CBSP35520 551 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CYLC1P35663 651 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 PEX19P40855 299 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CA7P43166 264 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 AVPR1BP47901 424 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TNFSF10P50591 281 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 RWDD2BP57060 319 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TAS2R50P59544 299 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 EIF3EP60228 445 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 PRAMEP78395 509 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 XIAPP98170 497 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CDH17Q12864 832 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 PRKG2Q13237 762 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ARHGAP19Q14CB8 494 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 IQCB1Q15051 598 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 NDUFA9Q16795 377 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ZNF630Q2M218 657 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 PARP6Q2NL67 630 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ASTE1Q2TB18 679 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 DEFB110Q30KQ9 67 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 FLYWCH1Q4VC44 716 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 FASTKD1Q53R41 847 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 KRTCAP3Q53RY4 240 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ANKRD20A2Q5SQ80 823 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ANKRD20A1Q5TYW2 823 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ABHD17BQ5VST6 288 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ANKRD20A3Q5VUR7 823 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 LRRC8EQ6NSJ5 796 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CAVIN1Q6NZI2 390 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 DARS2Q6PI48 645 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 NPNTQ6UXI9 565 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 GFRALQ6UXV0 394 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 OTOAQ7RTW8 1153 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 FJX1Q86VR8 437 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SERPINA9Q86WD7 417 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SRRM1Q8IYB3 904 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 CCDC170Q8IYT3 715 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SLC22A15Q8IZD6 547 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 PPM1NQ8N819 430 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 DNAAF3Q8N9W5 541 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TMEM178AQ8NBL3 297 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 BEND2Q8NDZ0 799 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 PPHLN1Q8NEY8 458 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 OR11G2Q8NGC1 345 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 OR5AR1Q8NGP9 310 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 OR2L8Q8NGY9 312 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 HMGCLL1Q8TB92 370 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SKA2Q8WVK7 121 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 METTL21AQ8WXB1 218 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TFAP2CQ92754 450 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 HAS2Q92819 552 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 DNAJC1Q96KC8 554 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 CABS1Q96KC9 395 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ZNF285Q96NJ3 590 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 NAP1L5Q96NT1 182 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 OR2A14Q96R47 310 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TUBB6Q9BUF5 446 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 BRINP2Q9C0B6 783 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 AKIRIN1Q9H9L7 192 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 NHEJ1Q9H9Q4 299 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 ZNF304Q9HCX3 659 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 MKKSQ9NPJ1 570 aaPredicted RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 LANCL2Q9NS86 450 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 COQ3Q9NZJ6 369 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 IFNKQ9P0W0 207 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 DHCR7Q9UBM7 475 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 C3orf18Q9UK00 162 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CDYLQ9Y232 598 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TDRKHQ9Y2W6 561 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 HS3ST3B1Q9Y662 390 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ESPL1Q14674 2120 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CELSR1Q9NYQ6 3014 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 IGLV3-12A0A075B6K2 115 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 SLC5A10A0PJK1 596 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 HYKKA2RU49 373 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 PABPN1LA6NDY0 278 aaKnown RBP3.31□□□□□ -1.88
XRN1-209ENST00000472625 PRSS29PA6NIE9 313 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 IDSB3KWA1 339 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 AKR1B15C9JRZ8 316 aaPredicted RBP3.31□□□□□ -1.88
XRN1-209ENST00000472625 H0YIG0 161 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 CCL21O00585 134 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 PRMT5O14744 637 aaPredicted RBP3.31□□□□□ -1.88
XRN1-209ENST00000472625 TTI1O43156 1089 aa3.31□□□□□ -1.88
XRN1-209ENST00000472625 BUD23O43709 281 aaKnown RBP3.31□□□□□ -1.88
XRN1-209ENST00000472625 SGTAO43765 313 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms