RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SH3BGRLO75368 114 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 SCELO95171 688 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 TGFB1P01137 390 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 UQCRHP07919 91 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 PIK3CBP42338 1070 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CCNG1P51959 295 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 HNRNPFP52597 415 aaKnown RBP14.13□□□□□ -0.15
CALD1-215ENST00000472096 LIM2P55344 173 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 VSNL1P62760 191 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 PHEXP78562 749 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 TRAF3Q13114 568 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 EXT1Q16394 746 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CPSF6Q16630 551 aaKnown RBP eCLIP14.13□□□□□ -0.15
CALD1-215ENST00000472096 TMEM35AQ53FP2 167 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 KHDRBS2Q5VWX1 349 aaKnown RBP14.13□□□□□ -0.15
CALD1-215ENST00000472096 B3GNTL1Q67FW5 361 aaPredicted RBP14.13□□□□□ -0.15
CALD1-215ENST00000472096 CHSY3Q70JA7 882 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CUZD1Q86UP6 607 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 FAM47BQ8NA70 645 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 TMEM52Q8NDY8 209 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 REPS1Q96D71 796 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CNDP1Q96KN2 507 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CDK15Q96Q40 435 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 CSF3RQ99062 836 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 MTERF1Q99551 399 aaKnown RBP14.13□□□□□ -0.15
CALD1-215ENST00000472096 TBCDQ9BTW9 1192 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 C1QTNF3Q9BXJ4 246 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 ROGDIQ9GZN7 287 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 OR51B5Q9H339 312 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 PPCSQ9HAB8 311 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 NECTIN3Q9NQS3 549 aa14.13□□□□□ -0.15
CALD1-215ENST00000472096 UBR5O95071 2799 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 SAGE2PA6NJ88 616 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 SAP18O00422 153 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 SLU7O95391 586 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 CLDN9O95484 217 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 GSTA1P08263 222 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 ATP5A1P25705 553 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 ARL1P40616 181 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 SSR2P43308 183 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 SLCO1A2P46721 670 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 SLC26A5P58743 744 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 RPS13P62277 151 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 ACTN3Q08043 901 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 ZRSR2Q15696 482 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 INPP5JQ15735 1006 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 GGTA1PQ4G0N0 100 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 DEPDC1Q5TB30 811 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 RPS27LQ71UM5 84 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 TDRPQ86YL5 185 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 IQCKQ8N0W5 287 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 WDR20Q8TBZ3 569 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 M1APQ8TC57 530 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 EPS8L3Q8TE67 593 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 ZNF483Q8TF39 744 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 ATP6V1E2Q96A05 226 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 NTMT1Q9BV86 223 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 CLMPQ9H6B4 373 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 LYRM4Q9HD34 91 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 MMP25Q9NPA2 562 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 SEMA4BQ9NPR2 832 aaPredicted RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 PRTFDC1Q9NRG1 225 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 MRPS33Q9Y291 106 aaKnown RBP14.12□□□□□ -0.15
CALD1-215ENST00000472096 CLDN16Q9Y5I7 305 aa14.12□□□□□ -0.15
CALD1-215ENST00000472096 ESPL1Q14674 2120 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 A0A1W2PPM1 405 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 SMIM23A6NLE4 172 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 TGFBR3LH3BV60 316 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 CYR61O00622 381 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 PLPP1O14494 284 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 TAC1P20366 129 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 HIST1H1TP22492 207 aaPredicted RBP14.11□□□□□ -0.15
CALD1-215ENST00000472096 HSD17B3P37058 310 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 RAP1GDS1P52306 607 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 HSD17B7P56937 341 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 HERVK_113P63132 956 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 ARG2P78540 354 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 RCN2Q14257 317 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 ZNF169Q14929 603 aaPredicted RBP14.11□□□□□ -0.15
CALD1-215ENST00000472096 AP5B1Q2VPB7 878 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 ZNF595Q8IYB9 648 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 CYP4X1Q8N118 509 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 ACOT4Q8N9L9 421 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 DNAJB14Q8TBM8 379 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 MAGEB10Q96LZ2 347 aaPredicted RBP14.11□□□□□ -0.15
CALD1-215ENST00000472096 MAPKAP1Q9BPZ7 522 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 CENPKQ9BS16 269 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 SORBS1Q9BX66 1292 aaKnown RBP14.11□□□□□ -0.15
CALD1-215ENST00000472096 ERVK-6Q9BXR3 956 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 RNF32Q9H0A6 362 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 KCMF1Q9P0J7 381 aa14.11□□□□□ -0.15
CALD1-215ENST00000472096 A0A1B0GTL3 188 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 DYTNA2CJ06 578 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 FOXO6A8MYZ6 492 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 ESPNB1AK53 854 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 CLDN4O14493 209 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 GLRA3O75311 464 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 ETHE1O95571 254 aa14.1□□□□□ -0.15
CALD1-215ENST00000472096 TSFMP43897 325 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms