RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C2orf27AQ580R0 203 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ARL13AQ5H913 290 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PPP2R2DQ66LE6 453 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GDF6Q6KF10 455 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SKA3Q8IX90 412 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CAMKVQ8NCB2 501 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 WDR20Q8TBZ3 569 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GNPDA2Q8TDQ7 276 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GAB3Q8WWW8 586 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 THAP4Q8WY91 577 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FAM46BQ96A09 425 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MSI2Q96DH6 328 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CDC6Q99741 560 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 EFCAB11Q9BUY7 163 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ERVK-6Q9BXR3 956 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 IL21RQ9HBE5 538 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 IL36AQ9UHA7 158 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NME7Q9Y5B8 376 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NLRP1Q9C000 1473 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SEC14L6B5MCN3 397 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 INSIG1O15503 277 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RGS9O75916 674 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SCAF4O95104 1147 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MAS1P04201 325 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PRKACAP17612 351 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ASPAP45381 313 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TAS2R40P59535 323 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TAF1AQ15573 450 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 RAET1LQ5VY80 246 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CDC42BPGQ6DT37 1551 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TRABD2AQ86V40 505 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MON1AQ86VX9 555 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF641Q96N77 438 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GBA3Q9H227 469 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 CREBZFQ9NS37 354 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NAALAD2Q9Y3Q0 740 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PCDHGA5Q9Y5G8 931 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 A0A087WUU8 490 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 A0A0U1RQJ8 604 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DVL1O14640 695 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SNCGO76070 127 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ALPIP09923 528 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NMBRP28336 390 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 NAA10P41227 235 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DVL1P1P54792 670 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ST3GAL3Q11203 375 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FADDQ13158 208 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 MPPED2Q15777 294 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF718Q3SXZ3 478 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TIGD3Q6B0B8 471 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 UGT2A3Q6UWM9 527 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF767PQ75MW2 155 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 YTHDF3Q7Z739 585 aaKnown RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PXKQ7Z7A4 578 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TMPRSS12Q86WS5 348 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 PDZD9Q8IXQ8 264 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 GTPBP8Q8N3Z3 284 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FAM46DQ8NEK8 389 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 DCUN1D4Q92564 292 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TAAR8Q969N4 342 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 SLC22A18Q96BI1 424 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 AURKBQ96GD4 344 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF419Q96HQ0 510 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 HS6ST2Q96MM7 605 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 VRK1Q99986 396 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-210ENST00000471181 FLRT1Q9NZU1 646 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TAC3Q9UHF0 121 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 WDR37Q9Y2I8 494 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TCAF1Q9Y4C2 921 aa6.66□□□□□ -1.34
BRCA1-210ENST00000471181 TNS3Q68CZ2 1445 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 FTCDNL1E5RQL4 147 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SEC14L5O43304 696 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 ZNF780AO75290 641 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 KNG1P01042 644 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC2A5P22732 501 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 GJA5P36382 358 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 ARHGAP19Q14CB8 494 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 AWAT2Q6E213 333 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 CERS6Q6ZMG9 384 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR56A1Q8NGH5 318 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR51G2Q8NGK0 314 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR5H2Q8NGV7 314 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 LNX1Q8TBB1 728 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC22A17Q8WUG5 538 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 CCDC74AQ96AQ1 378 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 COG8Q96MW5 612 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 CYP2S1Q96SQ9 504 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR8D2Q9GZM6 311 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PPIL3Q9H2H8 161 aaKnown RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR51B6Q9H340 312 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 TMEM134Q9H6X4 195 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 FAIMQ9NVQ4 179 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC2A8Q9NY64 477 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 ANKRD26Q9UPS8 1709 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms