RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 MAATS1Q7Z4T9 603 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 ZNF595Q8IYB9 648 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 KRT78Q8N1N4 520 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 OR5M9Q8NGP3 310 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 DAZLQ92904 295 aaKnown RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 PDLIM5Q96HC4 596 aaKnown RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 TTTY12Q9BZ98 90 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 COPS7BQ9H9Q2 264 aaPredicted RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 DEPPQ9NTK1 212 aa12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 ZNF223Q9UK11 482 aaPredicted RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 PPIEQ9UNP9 301 aaKnown RBP12.89□□□□□ -0.35
SEMA3F-208ENST00000470737 CTAGE15A4D2H0 777 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 OR14I1A6ND48 311 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 ANKDD1BA6NHY2 528 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 C4orf51C9J302 202 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 KLK8O60259 260 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 WDR47O94967 919 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 CD99P14209 185 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 GNAZP19086 355 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 GSTM2P28161 218 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 HNMTP50135 292 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 FOLH1Q04609 750 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 RUNX2Q13950 521 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 TEDDM1Q5T9Z0 273 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 SBSNQ6UWP8 590 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 TMIGD1Q6UXZ0 262 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 CTAGE6Q86UF2 777 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 KLHL7Q8IXQ5 586 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 KLHDC8AQ8IYD2 350 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 NKAPQ8N5F7 415 aaKnown RBP12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM47BQ8NA70 645 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 CHDHQ8NE62 594 aaPredicted RBP12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 LRRC39Q96DD0 335 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 CFAP36Q96G28 342 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 LDAHQ9H6V9 325 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 LIN28AQ9H9Z2 209 aaKnown RBP12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 PNPLA3Q9NST1 481 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 SLC17A6Q9P2U8 582 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 MYOTQ9UBF9 498 aa12.88□□□□□ -0.35
SEMA3F-208ENST00000470737 PINLYPA6NC86 204 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 NPEPPSL1A6NEC2 478 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM47E-STBD1D6RA91 191 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 WWP2O00308 870 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 PRKNO60260 465 aaPredicted RBP12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 BANF1O75531 89 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 OR6B1O95007 311 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 C1GALT1C1LP0DN25 315 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 TNNI3P19429 210 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 CNR1P21554 472 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 SOX3P41225 446 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 GPR143P51810 404 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 PGGT1BP53609 377 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 CDKL1Q00532 357 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 TGM3Q08188 693 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 STX4Q12846 297 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 PPP1R3AQ16821 1122 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 C16orf47Q6ZP98 133 aaPredicted RBP12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 RTL4Q6ZR62 310 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM47EQ6ZV65 393 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM109AQ8N4B1 249 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 BBOF1Q8ND07 529 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 MORN4Q8NDC4 146 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 OR14A16Q8NHC5 309 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 ANKRD7Q92527 254 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 MS4A6EQ96DS6 147 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 RASL10BQ96S79 203 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 EXO5Q9H790 373 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 IL1RL2Q9HB29 575 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 SACM1LQ9NTJ5 587 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 DNAJB12Q9NXW2 375 aaKnown RBP12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 ACAD8Q9UKU7 415 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 ITPR3Q14573 2671 aa12.87□□□□□ -0.35
SEMA3F-208ENST00000470737 LRIT2A6NDA9 550 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 G3V3Y1 287 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 CDC7O00311 574 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 TP73O15350 636 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 WDR1O75083 606 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 CLEC3AO75596 197 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 SEC31AO94979 1220 aaKnown RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 P04436 131 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 ZNF37AP17032 561 aaPredicted RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 HNRNPH1P31943 449 aaKnown RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 MAGEA5P43359 124 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms