RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	RPL37AP8	A6NKH3	93 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	OGT	O15294	1046 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	GRAP2	O75791	330 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	MELTF	P08582	738 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	ACKR3	P25106	362 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	RPS27A	P62979	156 aa	Known RBP	4.26	□□□□□ -1.73
SSB-209	ENST00000470621	RBBP4	Q09028	425 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	LEMD1	Q68G75	181 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	TMEM64	Q6YI46	380 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	HOOK3	Q86VS8	718 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	SLC39A11	Q8N1S5	342 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	C4orf32	Q8N8J7	132 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	C1orf147	Q96MC9	270 aa	Predicted RBP	4.26	□□□□□ -1.73
SSB-209	ENST00000470621	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.26	□□□□□ -1.73
SSB-209	ENST00000470621	C17orf62	Q9BQA9	187 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	ADPGK	Q9BRR6	497 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	CCM2	Q9BSQ5	444 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	CUEDC2	Q9H467	287 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF665	Q9H7R5	613 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	DEPP	Q9NTK1	212 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	GTF3C4	Q9UKN8	822 aa		4.26	□□□□□ -1.73
SSB-209	ENST00000470621	GTPBP10	A4D1E9	387 aa	Known RBP	4.25	□□□□□ -1.73
SSB-209	ENST00000470621	OOEP	A6NGQ2	149 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	LETM1	O95202	739 aa	Predicted RBP	4.25	□□□□□ -1.73
SSB-209	ENST00000470621	FGF19	O95750	216 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	SLC16A8	O95907	504 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	REN	P00797	406 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	FRK	P42685	505 aa	Predicted RBP	4.25	□□□□□ -1.73
SSB-209	ENST00000470621	ACY1	Q03154	408 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	MEP1B	Q16820	701 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	ECSCR	Q19T08	205 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	HIGD2B	Q4VC39	106 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	SLC25A30	Q5SVS4	291 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	FAM182A	Q5T1J6	154 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	CROCC	Q5TZA2	2017 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	LYPLAL1	Q5VWZ2	237 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	CEACAM19	Q7Z692	300 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	NLRP14	Q86W24	1093 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.25	□□□□□ -1.73
SSB-209	ENST00000470621	RNF149	Q8NC42	400 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	AFAP1L1	Q8TED9	768 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	HNRNPAB	Q99729	332 aa	Known RBP	4.25	□□□□□ -1.73
SSB-209	ENST00000470621	ACPT	Q9BZG2	426 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	LIME1	Q9H400	295 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	GRPEL1	Q9HAV7	217 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	TSPAN16	Q9UKR8	245 aa		4.25	□□□□□ -1.73
SSB-209	ENST00000470621	CLN5	O75503	358 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	SEMA4F	O95754	770 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	HP	P00738	406 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ODC1	P11926	461 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	OR1D2	P34982	312 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	RIDA	P52758	137 aa	Known RBP	4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ROR1	Q01973	937 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	C15orf32	Q32M92	178 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	POM121L1P	Q3SYA9	428 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ANKRD20A4	Q4UJ75	823 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	RFTN2	Q52LD8	501 aa	Predicted RBP	4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ANKRD20A8P	Q5CZ79	823 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ANKRD20A2	Q5SQ80	823 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ANKRD20A1	Q5TYW2	823 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ANKRD20A3	Q5VUR7	823 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	GBP6	Q6ZN66	633 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	CACUL1	Q86Y37	369 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ELMOD1	Q8N336	334 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	SUMF1	Q8NBK3	374 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ZNRF1	Q8ND25	227 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	OR7G3	Q8NG95	312 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	TYMSOS	Q8TAI1	123 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF274	Q96GC6	653 aa	Predicted RBP	4.24	□□□□□ -1.73
SSB-209	ENST00000470621	RCHY1	Q96PM5	261 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	IDI2	Q9BXS1	227 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	LRRCC1	Q9C099	1032 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	S100A14	Q9HCY8	104 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	SH3GLB2	Q9NR46	395 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	SLC7A10	Q9NS82	523 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.24	□□□□□ -1.73
SSB-209	ENST00000470621	GPR83	Q9NYM4	423 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	AUP1	Q9Y679	476 aa		4.24	□□□□□ -1.73
SSB-209	ENST00000470621	ADAMTS9	Q9P2N4	1935 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621		A0A1B0GTH9	108 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF840P	A6NDX5	716 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	IGLON5	A6NGN9	336 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	FBP2	O00757	339 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF354A	O60765	605 aa	Predicted RBP	4.23	□□□□□ -1.73
SSB-209	ENST00000470621	GLCE	O94923	617 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	VENTX	O95231	258 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	GH1	P01241	217 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	SKIL	P12757	684 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	GP9	P14770	177 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	CCDC158	Q5M9N0	1113 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	HECTD3	Q5T447	861 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	AGAP6	Q5VW22	663 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	SEL1L3	Q68CR1	1132 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	TUSC5	Q8IXB3	177 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	FBXL16	Q8N461	479 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	CSNK1G2-AS1	Q8NCQ2	148 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	C8orf46	Q8TAG6	207 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	ERGIC2	Q96RQ1	377 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	UTP14A	Q9BVJ6	771 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms