RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 OR10A6Q8NH74 314 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 ITCHQ96J02 903 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 PANX1Q96RD7 426 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 NUDT22Q9BRQ3 303 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.9□□□□□ -1.15
GTF3A-206ENST00000470606 KAT8Q9H7Z6 458 aaKnown RBP7.9□□□□□ -1.15
GTF3A-206ENST00000470606 RNPEPL1Q9HAU8 725 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 C1GALT1Q9NS00 363 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 FAM120CQ9NX05 1096 aaKnown RBP7.9□□□□□ -1.15
GTF3A-206ENST00000470606 EPHA6Q9UF33 1036 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 PADI4Q9UM07 663 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 R4GN57 208 aa7.9□□□□□ -1.15
GTF3A-206ENST00000470606 PCNX2A6NKB5 2137 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 A0A1W2PQM1 296 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 RNASET2O00584 256 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PROM1O43490 865 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ERN1O75460 977 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CPSF4O95639 269 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 AIFM1O95831 613 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 NCK1P16333 377 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 IL1RNP18510 177 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 HPCAL1P37235 193 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ALDH9A1P49189 494 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CASP9P55211 416 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PCBP4P57723 403 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 FLOT2Q14254 428 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 RCN1Q15293 331 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PRTGQ2VWP7 1150 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ARMC6Q6NXE6 501 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ZCCHC8Q6NZY4 707 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PRMT9Q6P2P2 845 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 TRIM40Q6P9F5 258 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 MSANTD1Q6ZTZ1 278 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PAGE2Q7Z2X7 111 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 SPRED1Q7Z699 444 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CALHM3Q86XJ0 350 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PTRH1Q86Y79 214 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 MCATQ8IVS2 390 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ZCCHC7Q8N3Z6 543 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CSNK1A1LQ8N752 337 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ENDOVQ8N8Q3 282 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 OR5T3Q8NGG3 340 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 NRG4Q8WWG1 115 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 GAL3ST3Q96A11 431 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 SLCO4A1Q96BD0 722 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PPCDCQ96CD2 204 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ZNF285Q96NJ3 590 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 PHF12Q96QT6 1004 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CSF3RQ99062 836 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 TBCDQ9BTW9 1192 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 BHLHE41Q9C0J9 482 aaPredicted RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 RAB33BQ9H082 229 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 RPF2Q9H7B2 306 aaKnown RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 BTNL2Q9UIR0 455 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 FBXW2Q9UKT8 454 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CES1P1Q9UKY3 287 aa7.89□□□□□ -1.15
GTF3A-206ENST00000470606 ZFHX2Q9C0A1 2572 aaPredicted RBP7.89□□□□□ -1.15
GTF3A-206ENST00000470606 CNOT1A5YKK6 2376 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TLCD2A6NGC4 264 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ARPC2O15144 300 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TBX19O60806 448 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 CIB2O75838 187 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ABCB1P08183 1280 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 NUDT7P0C024 238 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 SLC35G6P0C7Q6 338 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 PCSK2P16519 638 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ENGP17813 658 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 HOXD12P35452 270 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 SOX18P35713 384 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 FRKP42685 505 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TRPC1P48995 793 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 HNRNPFP52597 415 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ARFIP1P53367 373 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 EEFSECP57772 596 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 STXBP1P61764 594 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 BIRC2Q13490 618 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ADRM1Q16186 407 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 PRAMEF17Q5VTA0 474 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ZNF621Q6ZSS3 439 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TBC1D19Q8N5T2 526 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 EID2Q8N6I1 236 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TMEM52Q8NDY8 209 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 GOT1L1Q8NHS2 421 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 PNPT1Q8TCS8 783 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ZFP90Q8TF47 636 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 EXOSC8Q96B26 276 aaKnown RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 MTERF3Q96E29 417 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 THAP11Q96EK4 314 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 CNRIP1Q96F85 164 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 C10orf90Q96M02 699 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 CHST8Q9H2A9 424 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ARRDC1-AS1Q9H2J1 176 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 CXorf36Q9H7Y0 433 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 RMND5AQ9H871 391 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 SIRT3Q9NTG7 399 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-206ENST00000470606 TAS2R7Q9NYW3 318 aa7.88□□□□□ -1.15
GTF3A-206ENST00000470606 ACSL6Q9UKU0 697 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms