RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 SLC28A1O00337 649 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 PEX12O00623 359 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 ULK1O75385 1050 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 KLF7O75840 302 aaPredicted RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 RNF224P0DH78 156 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 C1GALT1C1LP0DN25 315 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 PCNAP12004 261 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 PIK3R1P27986 724 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 CASP2P42575 452 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 NEK2P51955 445 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 NCALDP61601 193 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 MEF2AQ02078 507 aaPredicted RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 KLF10Q13118 480 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 DDX39BQ13838 428 aaKnown RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 E2F2Q14209 437 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 SQLEQ14534 574 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 IMPG1Q17R60 797 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 ZNF385CQ66K41 422 aaPredicted RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 ADNP2Q6IQ32 1131 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 Q6ZSR9 355 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 CISD2Q8N5K1 135 aaKnown RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 CPSF7Q8N684 471 aaKnown RBP12.91□□□□□ -0.34
LINC00173-201ENST00000470091 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 EFCAB11Q9BUY7 163 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 ACPTQ9BZG2 426 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 PCBD2Q9H0N5 130 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 EHD1Q9H4M9 534 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 PELI2Q9HAT8 420 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 TXLNGQ9NUQ3 528 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 SLC12A4Q9UP95 1085 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 CCL27Q9Y4X3 112 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 AP1M2Q9Y6Q5 423 aa12.91□□□□□ -0.34
LINC00173-201ENST00000470091 HIVEP3Q5T1R4 2406 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 H0YIV9 168 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 LSM1O15116 133 aaKnown RBP12.9□□□□□ -0.34
LINC00173-201ENST00000470091 RGS14O43566 566 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 T-ENOLP0DO92 83 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 CD1EP15812 388 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 ALAS2P22557 587 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 FOLR3P41439 243 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 REEP5Q00765 189 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 SSPNQ14714 243 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 ATP6AP1LQ52LC2 224 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 C6orf136Q5SQH8 315 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 ICE2Q659A1 982 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 MED27Q6P2C8 311 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 POU5F2Q8N7G0 328 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 WDR20Q8TBZ3 569 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 NSL1Q96IY1 281 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 PPP3R2Q96LZ3 170 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 GBP5Q96PP8 586 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 SMAD5Q99717 465 aaKnown RBP12.9□□□□□ -0.34
LINC00173-201ENST00000470091 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 PRM3Q9NNZ6 103 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 POLR3HQ9Y535 204 aaPredicted RBP12.9□□□□□ -0.34
LINC00173-201ENST00000470091 CNTRLQ7Z7A1 2325 aa12.9□□□□□ -0.34
LINC00173-201ENST00000470091 MDC1Q14676 2089 aaKnown RBP12.9□□□□□ -0.34
LINC00173-201ENST00000470091 CREBBPQ92793 2442 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 A0A0J9YY10 115 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 ZSCAN9O15535 394 aaPredicted RBP12.89□□□□□ -0.35
LINC00173-201ENST00000470091 PRICKLE3O43900 615 aaPredicted RBP12.89□□□□□ -0.35
LINC00173-201ENST00000470091 CNOT3O75175 753 aaKnown RBP12.89□□□□□ -0.35
LINC00173-201ENST00000470091 UNC5CO95185 931 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 GRIA3P42263 894 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 SCTRP47872 440 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 CPA2P48052 419 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 GABRA4P48169 554 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 ATP4BP51164 291 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 NME5P56597 212 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 STX1BP61266 288 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 ERVK-8P63133 956 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
LINC00173-201ENST00000470091 LAPTM5Q13571 262 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 NKAIN1Q4KMZ8 207 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 GALNT16Q8N428 558 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 DNAJC22Q8N4W6 341 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 FNDC5Q8NAU1 212 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 CLEC1AQ8NC01 280 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 ZNF740Q8NDX6 193 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 OR7G3Q8NG95 312 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 OR2A1Q8NGT9 310 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 FLVCR1-AS1Q8TAF5 88 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 SNRNP40Q96DI7 357 aaKnown RBP12.89□□□□□ -0.35
LINC00173-201ENST00000470091 FER1L6-AS2Q96M78 137 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 MTERF1Q99551 399 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms