RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KLHL4Q9C0H6 718 aa17.22■□□□□ 0.35
SMC4-211ENST00000469858 GORASP2Q9H8Y8 452 aa17.22■□□□□ 0.35
SMC4-211ENST00000469858 ACSL6Q9UKU0 697 aa17.22■□□□□ 0.35
SMC4-211ENST00000469858 ATG4BQ9Y4P1 393 aa17.22■□□□□ 0.35
SMC4-211ENST00000469858 TNRC6BQ9UPQ9 1833 aaKnown RBP17.22■□□□□ 0.35
SMC4-211ENST00000469858 H0YGG7 62 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 SCELO95171 688 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 EIF2S1P05198 315 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 UMPSP11172 480 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 TDGF1P13385 188 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 ST6GAL1P15907 406 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 DDX5P17844 614 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 CDH3P22223 829 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 TSFMP43897 325 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 ARF3P61204 181 aaPredicted RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 SNRPNP63162 240 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 MAP7Q14244 749 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 IRAK1BP1Q5VVH5 260 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 MRM1Q6IN84 353 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 RNF44Q7L0R7 432 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 CAMKVQ8NCB2 501 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 OR5AK3PQ8NH89 298 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 UTP15Q8TED0 518 aaKnown RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 DPH2Q9BQC3 489 aaPredicted RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.21■□□□□ 0.35
SMC4-211ENST00000469858 SEMA6CQ9H3T2 930 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 SLAMF7Q9NQ25 335 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 CORO2BQ9UQ03 480 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 ASB4Q9Y574 426 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 SNX11Q9Y5W9 270 aa17.21■□□□□ 0.35
SMC4-211ENST00000469858 LILRA5A6NI73 299 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 GLOD5A6NK44 160 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 PROS1P07225 676 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 DRD2P14416 443 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 MANFP55145 182 aaKnown RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 RELAQ04206 551 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 C14orf28Q4W4Y0 310 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.2■□□□□ 0.341e-13■■■■■ 65.9
SMC4-211ENST00000469858 IRGCQ6NXR0 463 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 AMIGO2Q86SJ2 522 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 C17orf82Q86X59 251 aaPredicted RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 TMEM126BQ8IUX1 230 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 UCK1Q9HA47 277 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 IL21RQ9HBE5 538 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 SNX8Q9Y5X2 465 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 LAMA1P25391 3075 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 A0A1W2PR48 441 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 HNRNPRO43390 633 aaKnown RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 GUCY1B2O75343 617 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 CREG1O75629 220 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 KCNK5O95279 499 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 CHI3L1P36222 383 aaPredicted RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 CAPZBP47756 277 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 CASP9P55211 416 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 CSTF1Q05048 431 aaKnown RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 RGNQ15493 299 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 MTX3Q5HYI7 312 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 PMS2CLQ68D20 193 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 HMBOX1Q6NT76 420 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 ZZZ3Q8IYH5 903 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 NATD1Q8N6N6 113 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 FBXO30Q8TB52 745 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 NETO1Q8TDF5 533 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 ZNF764Q96H86 408 aaPredicted RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 TRAPPC9Q96Q05 1148 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 TMEM121BQ9BXQ6 578 aaPredicted RBP17.2■□□□□ 0.34
SMC4-211ENST00000469858 TMEM74BQ9NUR3 256 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 UTS2RQ9UKP6 389 aa17.2■□□□□ 0.34
SMC4-211ENST00000469858 PI4KAP42356 2102 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 URADA6NGE7 173 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 WASHC1A8K0Z3 465 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 AIFM1O95831 613 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 GNSP15586 552 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 PCBP4P57723 403 aaKnown RBP17.19■□□□□ 0.34
SMC4-211ENST00000469858 BNIP3Q12983 259 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 HSPB3Q12988 150 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 SUZ12Q15022 739 aaKnown RBP17.19■□□□□ 0.34
SMC4-211ENST00000469858 VMACQ2NL98 169 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 SFT2D3Q587I9 215 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CPZQ66K79 652 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 OGFOD3Q6PK18 319 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 PTOV1Q86YD1 416 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 OR5P2Q8WZ92 322 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 RNF145Q96MT1 663 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CXorf36Q9H7Y0 433 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 EHD3Q9NZN3 535 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 RAPGEFL1Q9UHV5 662 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 DTNAQ9Y4J8 743 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 GMEB1Q9Y692 573 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 MT-ND1P03886 318 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 NUDT7P0C024 238 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 IL1RNP18510 177 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CRATP43155 626 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CTSKP43235 329 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 C16orf72Q14CZ0 275 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms