RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CCL11P51671 97 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SESN3P58005 492 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SP140Q13342 867 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ATP1A4Q13733 1029 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CYP2A13Q16696 494 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 NKAIN1Q4KMZ8 207 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 TTLL10Q6ZVT0 673 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ASB18Q6ZVZ8 466 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 DHDDSQ86SQ9 333 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 DTWD1Q8N5C7 304 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PROKR1Q8TCW9 393 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 RHBDF1Q96CC6 855 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CCDC124Q96CT7 223 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PKP4Q99569 1192 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SLC6A20Q9NP91 592 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ZIM2Q9NZV7 527 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 NDOR1Q9UHB4 597 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PTRH2Q9Y3E5 179 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 FLNCQ14315 2725 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 DYTNA2CJ06 578 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 K7EPI3 171 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 OR7A17O14581 309 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 CFLARO15519 480 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 GGT5P36269 586 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 GCGRP47871 477 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 VSX2P58304 361 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 SAMD4BQ5PRF9 694 aaKnown RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 FRMPD2BQ6IN97 320 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 TCTN3Q6NUS6 607 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 PAOXQ6QHF9 649 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 METTL27Q8N6F8 245 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 SPAG4Q9NPE6 437 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 SLC22A11Q9NSA0 550 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 GID8Q9NWU2 228 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 C6orf203Q9P0P8 240 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-208ENST00000469744 TMEM181Q9P2C4 612 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 ADAMTS6Q9UKP5 1117 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 PADI2Q9Y2J8 665 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 ASB1Q9Y576 335 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 TIMM22Q9Y584 194 aa16.72■□□□□ 0.27
MRPL28-208ENST00000469744 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 LOC105369274A0A096LPK9 316 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 LOC102723532A0A0G2JNH3 316 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 A0A0J9YVX5 310 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ACOT8O14734 319 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 CASQ2O14958 399 aaPredicted RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 SORBS2O94875 1100 aaKnown RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 BAG2O95816 211 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 SLC16A8O95907 504 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ANXA5P08758 320 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ERGP11308 486 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 TRAF3Q13114 568 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 FLOT2Q14254 428 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 LETMD1Q6P1Q0 360 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 BLOC1S3Q6QNY0 202 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 OR4N4Q8N0Y3 316 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 OR52B6Q8NGF0 335 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 METTL6Q8TCB7 284 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ASB11Q8WXH4 323 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ZUFSPQ96AP4 578 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 ASB9Q96DX5 294 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 EGFL8Q99944 293 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 GPATCH1Q9BRR8 931 aaKnown RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 DPH7Q9BTV6 452 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 NTMT1Q9BV86 223 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 TRIM54Q9BYV2 358 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 BATF3Q9NR55 127 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 WWOXQ9NZC7 414 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 STOX2Q9P2F5 926 aaPredicted RBP16.71■□□□□ 0.27
MRPL28-208ENST00000469744 OPTCQ9UBM4 332 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 CD300AQ9UGN4 299 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 TAC3Q9UHF0 121 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 TRPS1Q9UHF7 1281 aa16.71■□□□□ 0.27
MRPL28-208ENST00000469744 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.26
MRPL28-208ENST00000469744 A0A1B0GX78 115 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 A6NL46 340 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 PEX1O43933 1283 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 FKBP9O95302 570 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 WISP1O95388 367 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 EIF2S1P05198 315 aaKnown RBP16.7■□□□□ 0.26
MRPL28-208ENST00000469744 PCSK2P16519 638 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 FOLR3P41439 243 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 PNLIPRP1P54315 467 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 EMX2Q04743 252 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 TRIM25Q14258 630 aaKnown RBP16.7■□□□□ 0.26
MRPL28-208ENST00000469744 PHKG1Q16816 387 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 FBXO48Q5FWF7 155 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 C6orf136Q5SQH8 315 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 IRAK1BP1Q5VVH5 260 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 EFCAB3Q8N7B9 438 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 CDYL2Q8N8U2 506 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 OR4F6Q8NGB9 312 aa16.7■□□□□ 0.26
MRPL28-208ENST00000469744 ZNF480Q8WV37 535 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms