RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CLK4Q9HAZ1 481 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 TMEM216Q9P0N5 145 aa13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 ABI3Q9P2A4 366 aa13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 FETUBQ9UGM5 382 aa13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-211ENST00000467553 A0A088AWK7 358 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 SMIM23A6NLE4 172 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 FOXO6A8MYZ6 492 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 B3GALT2O43825 422 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 PRMT3O60678 531 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 CELA2AP08217 269 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF10P21506 573 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 JAK1P23458 1154 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 PIK3CGP48736 1102 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 VSNL1P62760 191 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 BTG2P78543 158 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 RHAGQ02094 409 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 PCDH1Q08174 1060 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 TGM3Q08188 693 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 RUNX2Q13950 521 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 E2F2Q14209 437 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 ABRAXAS2Q15018 415 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 ABHD17BQ5VST6 288 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 PLAG1Q6DJT9 500 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 CHSY3Q70JA7 882 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 LAS2Q8IYD9 372 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 TSLPQ969D9 159 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 MTFMTQ96DP5 389 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 MAGEB10Q96LZ2 347 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 MS4A8Q9BY19 250 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 COPS7BQ9H9Q2 264 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 ENTPD4Q9Y227 616 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 RNF11Q9Y3C5 154 aa13.2□□□□□ -0.3
CCHCR1-211ENST00000467553 LRBAP50851 2863 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 OR5H15A6NDH6 313 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 MAGEB17A8MXT2 336 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 STX16-NPEPL1H3BU86 382 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SAP18O00422 153 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 STX16O14662 325 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 HNRNPRO43390 633 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 RASAL1O95294 804 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 CLDN9O95484 217 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SBK3P0C264 359 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 KRT15P19012 456 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 TAC1P20366 129 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 CERS1P27544 350 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 TDGF1P3P51864 188 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 CCNG1P51959 295 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 OR4D2P58180 307 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 RBPJQ06330 500 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 EXT1Q16394 746 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF787Q6DD87 383 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 METTL2BQ6P1Q9 378 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 TMEM151AQ8N4L1 468 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SRFBP1Q8NEF9 429 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 CMTM7Q96FZ5 175 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF354BQ96LW1 612 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 NSUN5Q96P11 429 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 CDK15Q96Q40 435 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 MTERF1Q99551 399 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 NPLQ9BXD5 320 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 OR51B5Q9H339 312 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 PRDM7Q9NQW5 492 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 STMN3Q9NZ72 180 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 ADGRE2Q9UHX3 823 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 PCDHGA11Q9Y5H2 935 aa13.19□□□□□ -0.3
CCHCR1-211ENST00000467553 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 A8MT66 165 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 A8MUA0 341 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 A8MUI8 341 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 RTCAO00442 366 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 OR7A17O14581 309 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 MLYCDO95822 493 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 WDPCPO95876 746 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 ITGAMP11215 1152 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 TSPAN8P19075 237 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 COL8A1P27658 744 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 HSD17B3P37058 310 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 MTTPP55157 894 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 ART3Q13508 389 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 BTBD16Q32M84 506 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms