RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SGCZQ96LD1 299 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 NDNQ99608 321 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 SMR3AQ99954 134 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 CNPPD1Q9BV87 410 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 CCDC68Q9H2F9 335 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 PLAC1Q9HBJ0 212 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 HPF1Q9NWY4 346 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 ACOT7O00154 380 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 PTMSP20962 102 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 HNRNPH1P31943 449 aaKnown RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 CEACAM8P31997 349 aaPredicted RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 HK2P52789 917 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 DEFB113Q30KQ7 82 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 TTC27Q6P3X3 843 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 CASC4Q6P4E1 433 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 NXPE4Q6UWF7 544 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 RTL4Q6ZR62 310 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 GK5Q6ZS86 529 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 GALNT7Q86SF2 657 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ZNF321PQ8N8H1 164 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 OR10Q1Q8NGQ4 319 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 CALML6Q8TD86 181 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 LINGO1Q96FE5 620 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 PDLIM5Q96HC4 596 aaKnown RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 PROK2Q9HC23 129 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 DMRT3Q9NQL9 472 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 C20orf96Q9NUD7 363 aaPredicted RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 ARL15Q9NXU5 204 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 TUBA8Q9NY65 449 aaPredicted RBP11.27□□□□□ -0.61
UBR4-211ENST00000467272 TAS2R13Q9NYV9 303 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 B4GALT7Q9UBV7 327 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 VTI1BQ9UEU0 232 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 ATG4BQ9Y4P1 393 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
UBR4-211ENST00000467272 LRIT2A6NDA9 550 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 URADA6NGE7 173 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 FAM47E-STBD1D6RA91 191 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 G3V3Y1 287 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 PSMD12O00232 456 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 WWP2O00308 870 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 FGGP02679 453 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 AHSGP02765 367 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 SERPIND1P05546 499 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ENO2P09104 434 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 CCL3P10147 92 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 HNF4AP41235 474 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 RGS4P49798 205 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 RAB38P57729 211 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 SARNPP82979 210 aaKnown RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 CSHL1Q14406 222 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 ZNF791Q3KP31 576 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 HSDL2Q6YN16 418 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 VN1R5Q7Z5H4 357 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 PRIMA1Q86XR5 153 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ZNF595Q8IYB9 648 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 KLHDC8AQ8IYD2 350 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ULK2Q8IYT8 1036 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 MYO1HQ8N1T3 1032 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 LRRC25Q8N386 305 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 TXLNBQ8N3L3 684 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 TBC1D19Q8N5T2 526 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 MORN4Q8NDC4 146 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ATL1Q8WXF7 558 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ASB15Q8WXK1 588 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 GAL3ST3Q96A11 431 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ALKBH8Q96BT7 664 aaKnown RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 SARAFQ96BY9 339 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 C18orf12Q96KH6 178 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 TSNARE1Q96NA8 513 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 FAM167BQ9BTA0 163 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 RHBGQ9H310 441 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 PNO1Q9NRX1 252 aaKnown RBP11.26□□□□□ -0.61
UBR4-211ENST00000467272 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
UBR4-211ENST00000467272 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 CTNSO60931 367 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 RAF1P04049 648 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HIST1H2AGP0C0S8 130 aaPredicted RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 CCDC175P0C221 793 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 GABRA1P14867 456 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HIST1H2ADP20671 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms