RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SLC2A2P11168 524 aaPredicted RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 PFKFB1P16118 471 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 MPZP25189 248 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 ADORA1P30542 326 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 MTHFRP42898 656 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 CAPZA2P47755 286 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 PPP5CP53041 499 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 TIMM10P62072 90 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 C9orf152Q5JTZ5 239 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 LCN1P1Q5VSP4 162 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 NUP54Q7Z3B4 507 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 MMD2Q8IY49 270 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 THAP8Q8NA92 274 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 OR6S1Q8NH40 331 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 CFAP61Q8NHU2 1237 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 GATAD1Q8WUU5 269 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 ARNTL2Q8WYA1 636 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 NXNL1Q96CM4 212 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 PGAP3Q96FM1 320 aaPredicted RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 THOC1Q96FV9 657 aaKnown RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 ZNF486Q96H40 463 aaPredicted RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 GLT1D1Q96MS3 346 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 GOLPH3LQ9H4A5 285 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 RPAP3Q9H6T3 665 aaPredicted RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 TRPV4Q9HBA0 871 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 AATFQ9NY61 560 aaKnown RBP eCLIP2.85□□□□□ -1.95
XRN1-206ENST00000467077 RAI14Q9P0K7 980 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 NFKBIL1Q9UBC1 381 aaPredicted RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 B4GALT7Q9UBV7 327 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 ANAPC2Q9UJX6 822 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 TMED3Q9Y3Q3 217 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 MTCH2Q9Y6C9 303 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 DMXL1Q9Y485 3027 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 FANCIQ9NVI1 1328 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 SYNRGQ9UMZ2 1314 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 BAZ2AQ9UIF9 1905 aaKnown RBP2.85□□□□□ -1.95
XRN1-206ENST00000467077 PLXNA3P51805 1871 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 RALGAPA2Q2PPJ7 1873 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 A0A1W2PPQ1 181 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 A0A1W2PR80 420 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 TCRBV21S2A2A0A5A6 115 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 CIAO1O76071 339 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 PGK2P07205 417 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 ASGR1P07306 291 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 RAB40ALP0C0E4 278 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 LHCGRP22888 699 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 CCR3P51677 355 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 ZNF75DP51815 510 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MAPK12P53778 367 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 CCL23P55773 120 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 LYZP61626 148 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 CYCSP99999 105 aaKnown RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 GUCY2DQ02846 1103 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 CALCOCO2Q13137 446 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 ALCAMQ13740 583 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 SNTB1Q13884 538 aaKnown RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 IL11RAQ14626 422 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 COG2Q14746 738 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 KYNUQ16719 465 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 FHL5Q5TD97 284 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 LYSMD4Q5XG99 296 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 PRR27Q6MZM9 219 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 UGT3A1Q6NUS8 523 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MFSD12Q6NUT3 480 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 SLC47A2Q86VL8 602 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 TSPAN14Q8NG11 270 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MAPK15Q8TD08 544 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MIPOL1Q8TD10 442 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 APOBEC4Q8WW27 367 aaKnown RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 ARSGQ96EG1 525 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 C12orf42Q96LP6 360 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 ZNF830Q96NB3 372 aaPredicted RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 FAM49AQ9H0Q0 323 aaPredicted RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 ANKZF1Q9H8Y5 726 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MYNNQ9NPC7 610 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 SPHK2Q9NRA0 654 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 OLAHQ9NV23 265 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 PRMT7Q9NVM4 692 aaPredicted RBP2.84□□□□□ -1.95
XRN1-206ENST00000467077 HOXC10Q9NYD6 342 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 HAO2Q9NYQ3 351 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 WDR35Q9P2L0 1181 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 TBX21Q9UL17 535 aa2.84□□□□□ -1.95
XRN1-206ENST00000467077 MYH7BA7E2Y1 1941 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 MYH7P12883 1935 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 A0A0U1RQG5 324 aaPredicted RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 A0A1B0GUL7 405 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 EPOPA6NHQ4 379 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 MPTX1A8MV57 137 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 MPHOSPH10O00566 681 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 ARPC2O15144 300 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 SPRY1O43609 319 aaPredicted RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 DUSP11O75319 330 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 TBX10O75333 385 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 FLOT1O75955 427 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 MELTFP08582 738 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 GP9P14770 177 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 IL9P15248 144 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 PRKACGP22612 351 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 PTGER4P35408 488 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 CSNK2BP67870 215 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms