RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 BSGP35613 385 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 KRT6CP48668 564 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 HTR6P50406 440 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 HNRNPFP52597 415 aaKnown RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 FOXA1P55317 472 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ASPHQ12797 758 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SLAMF1Q13291 335 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 KCNAB2Q13303 367 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 RAPSNQ13702 412 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 MPP2Q14168 576 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ABRAXAS2Q15018 415 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 NSDHLQ15738 373 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 C10orf62Q5T681 223 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SCIMPQ6UWF3 145 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ZCCHC23Q6ZST2 131 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 NDUFAF7Q7L592 441 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 FAM47BQ8NA70 645 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 TMEM52Q8NDY8 209 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SLC39A7Q92504 469 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 VPS50Q96JG6 964 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 CNDP1Q96KN2 507 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 PKNOX2Q96KN3 472 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 CSF3RQ99062 836 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ZNF717Q9BY31 904 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SEMA4CQ9C0C4 833 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 STMN4Q9H169 189 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ZNF160Q9HCG1 818 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 LYRM4Q9HD34 91 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 TNFRSF12AQ9NP84 129 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 FBXW2Q9UKT8 454 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 SLC12A4Q9UP95 1085 aa11.65□□□□□ -0.54
CHPF2-202ENST00000465601 LOC102723996A0A087X1L8 192 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 MKRN2OSH3BPM6 223 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CYR61O00622 381 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CRCPO75575 148 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 SEMA3DO95025 777 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 HPP00738 406 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 GBAP04062 536 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CYC1P08574 325 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CHN1P15882 459 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 MAOAP21397 527 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 SERPINB4P48594 390 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 ARFIP1P53367 373 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 MAGOHP61326 146 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 AIMP2Q13155 320 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 PCOLCEQ15113 449 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 QSOX2Q6ZRP7 698 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CPEB2Q7Z5Q1 589 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 ZCCHC7Q8N3Z6 543 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 GALNT16Q8N428 558 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 CLEC1AQ8NC01 280 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 MRPL1Q9BYD6 325 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 DDX31Q9H8H2 851 aaKnown RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 BRF2Q9HAW0 419 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 NECTIN3Q9NQS3 549 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 PRDM9Q9NQV7 894 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 ZNF71Q9NQZ8 489 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 PRTFDC1Q9NRG1 225 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 AHSPQ9NZD4 102 aa11.64□□□□□ -0.55
CHPF2-202ENST00000465601 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-202ENST00000465601 BSNQ9UPA5 3926 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 A0A0A6YYD5 115 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 NSG1A0A0A6YYJ2 146 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 MYOCOSA0A1B0GUC4 107 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 H3BQF6 201 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 K7EM74 188 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CLDN4O14493 209 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 PCDH17O14917 1159 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 TM9SF1O15321 606 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 TMPRSS11DO60235 418 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 NPHS1O60500 1241 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 SEC24DO94855 1032 aaPredicted RBP11.63□□□□□ -0.55
CHPF2-202ENST00000465601 ZWINTO95229 277 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 KLK1P06870 262 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CHRNGP07510 517 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 NR1D1P20393 614 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CPN2P22792 545 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 ITGA3P26006 1051 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 TSFMP43897 325 aaKnown RBP11.63□□□□□ -0.55
CHPF2-202ENST00000465601 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
CHPF2-202ENST00000465601 OR4D2P58180 307 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 HMGCS1Q01581 520 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 Q0VFX4 171 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 SLC13A2Q13183 592 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 RCN2Q14257 317 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 SFT2D3Q587I9 215 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 ARL13AQ5H913 290 aaPredicted RBP11.63□□□□□ -0.55
CHPF2-202ENST00000465601 C18orf63Q68DL7 685 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CYP20A1Q6UW02 462 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 HDXQ7Z353 690 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CLNKQ7Z7G1 428 aa11.63□□□□□ -0.55
CHPF2-202ENST00000465601 CUZD1Q86UP6 607 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms