RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 LOC102723996A0A087X1L8 192 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 A0A088AWK7 358 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 NSG1A0A0A6YYJ2 146 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CYR61O00622 381 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 TMPRSS11DO60235 418 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 PRMT3O60678 531 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 ESRRBO95718 433 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 HPP00738 406 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 MYZAPP0CAP1 466 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 ZNF10P21506 573 aaPredicted RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 IL10P22301 178 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 ITGA3P26006 1051 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 PPP2R1BP30154 601 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 HPDP32754 393 aaPredicted RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 ETV4P43268 484 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 RRADP55042 308 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 PKNOX1P55347 436 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 HNRNPH2P55795 449 aaKnown RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 HMGCS1Q01581 520 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 ID2Q02363 134 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CUL3Q13618 768 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 SFT2D3Q587I9 215 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CES4AQ5XG92 561 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 C18orf63Q68DL7 685 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CLEC6AQ6EIG7 209 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 NDUFAF7Q7L592 441 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CPEB2Q7Z5Q1 589 aaKnown RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 OR4N5Q8IXE1 308 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 GALNT16Q8N428 558 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 CLEC1AQ8NC01 280 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 PGM2Q96G03 612 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 MAGEB10Q96LZ2 347 aaPredicted RBP10.96□□□□□ -0.65
CUX1-207ENST00000465461 IP6K3Q96PC2 410 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 SERPINI1Q99574 410 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 SLC25A23Q9BV35 468 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 ROGDIQ9GZN7 287 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 TMBIM4Q9HC24 238 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 PRTFDC1Q9NRG1 225 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 SENP1Q9P0U3 644 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 MID2Q9UJV3 735 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 PTGDR2Q9Y5Y4 395 aa10.96□□□□□ -0.65
CUX1-207ENST00000465461 A0A0A6YYD5 115 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 MKRN2OSH3BPM6 223 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 LDB3O75112 727 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 CRCPO75575 148 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 C1QL1O75973 258 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 KLK1P06870 262 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 BPGMP07738 259 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 H2AFXP16104 143 aaPredicted RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 CPN2P22792 545 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 JAK1P23458 1154 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ARRB2P32121 409 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ST13P50502 369 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 OR4D2P58180 307 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 MAGOHP61326 146 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 BTKQ06187 659 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 NFATC3Q12968 1075 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 SLC13A2Q13183 592 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 CUZD1Q86UP6 607 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ANKRD42Q8N9B4 389 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 C9orf43Q8TAL5 461 aaPredicted RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 AGR3Q8TD06 166 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 DOK4Q8TEW6 326 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 NACC2Q96BF6 587 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ARL8AQ96BM9 186 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 WBP1Q96G27 269 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 CNDP1Q96KN2 507 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 PAIP2Q9BPZ3 127 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 WDR77Q9BQA1 342 aaPredicted RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 CENPKQ9BS16 269 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 SLC29A3Q9BZD2 475 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ACPTQ9BZG2 426 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ZNF700Q9H0M5 742 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 SLC25A18Q9H1K4 315 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 CLK4Q9HAZ1 481 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 PRDM9Q9NQV7 894 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 PNO1Q9NRX1 252 aaKnown RBP10.95□□□□□ -0.66
CUX1-207ENST00000465461 PSD3Q9NYI0 1048 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 GPR83Q9NYM4 423 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 ATG4BQ9Y4P1 393 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 CLDN16Q9Y5I7 305 aa10.95□□□□□ -0.66
CUX1-207ENST00000465461 IGKV3D-11A0A0A0MRZ8 115 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 A0A1W2PR48 441 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 GLOD5A6NK44 160 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ULK1O75385 1050 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 LYPLA1O75608 230 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 CEACAM4O75871 244 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 SCELO95171 688 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 KRT6AP02538 564 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 KRT6BP04259 564 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ENO1P06733 434 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 FAM58BPP0C7Q3 252 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ITGAMP11215 1152 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 TPP2P29144 1249 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms