RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 LANCL2Q9NS86 450 aa8.64□□□□□ -1.03
APP-213ENST00000464867 NLE1Q9NVX2 485 aaPredicted RBP8.64□□□□□ -1.03
APP-213ENST00000464867 TMEM160Q9NX00 188 aa8.64□□□□□ -1.03
APP-213ENST00000464867 TRMT1Q9NXH9 659 aaKnown RBP8.64□□□□□ -1.03
APP-213ENST00000464867 PSD3Q9NYI0 1048 aa8.64□□□□□ -1.03
APP-213ENST00000464867 FEZ2Q9UHY8 353 aaPredicted RBP8.64□□□□□ -1.03
APP-213ENST00000464867 LCMT1Q9UIC8 334 aa8.64□□□□□ -1.03
APP-213ENST00000464867 ZNF281Q9Y2X9 895 aa8.64□□□□□ -1.03
APP-213ENST00000464867 NAALAD2Q9Y3Q0 740 aa8.64□□□□□ -1.03
APP-213ENST00000464867 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
APP-213ENST00000464867 LGALS16A8MUM7 142 aa8.63□□□□□ -1.03
APP-213ENST00000464867 DEFB108AA8MXU0 73 aa8.63□□□□□ -1.03
APP-213ENST00000464867 PROSCO94903 275 aa8.63□□□□□ -1.03
APP-213ENST00000464867 OR6B1O95007 311 aa8.63□□□□□ -1.03
APP-213ENST00000464867 TMIGD3P0DMS9 266 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 MSNP26038 577 aaKnown RBP8.63□□□□□ -1.03
APP-213ENST00000464867 PPARGP37231 505 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 DNASE1L1P49184 302 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ABATP80404 500 aa8.63□□□□□ -1.03
APP-213ENST00000464867 PHKG1Q16816 387 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ZNF750Q32MQ0 723 aa8.63□□□□□ -1.03
APP-213ENST00000464867 DPCR1Q3MIW9 517 aa8.63□□□□□ -1.03
APP-213ENST00000464867 C6orf52Q5T4I8 152 aa8.63□□□□□ -1.03
APP-213ENST00000464867 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 HECTD2Q5U5R9 776 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ZNF425Q6IV72 752 aa8.63□□□□□ -1.03
APP-213ENST00000464867 GOLM1Q8NBJ4 401 aa8.63□□□□□ -1.03
APP-213ENST00000464867 NFAM1Q8NET5 270 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 OR6P1Q8NGX9 317 aa8.63□□□□□ -1.03
APP-213ENST00000464867 NEIL3Q8TAT5 605 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ZCCHC10Q8TBK6 192 aa8.63□□□□□ -1.03
APP-213ENST00000464867 EPS8L3Q8TE67 593 aaKnown RBP8.63□□□□□ -1.03
APP-213ENST00000464867 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ERGIC2Q96RQ1 377 aa8.63□□□□□ -1.03
APP-213ENST00000464867 CARD6Q9BX69 1037 aa8.63□□□□□ -1.03
APP-213ENST00000464867 SYNPO2LQ9H987 977 aa8.63□□□□□ -1.03
APP-213ENST00000464867 ACKR4Q9NPB9 350 aa8.63□□□□□ -1.03
APP-213ENST00000464867 TUBA8Q9NY65 449 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
APP-213ENST00000464867 TAC3Q9UHF0 121 aa8.63□□□□□ -1.03
APP-213ENST00000464867 BOKQ9UMX3 212 aaPredicted RBP8.63□□□□□ -1.03
APP-213ENST00000464867 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
APP-213ENST00000464867 FREM1Q5H8C1 2179 aa8.62□□□□□ -1.03
APP-213ENST00000464867 SVEP1Q4LDE5 3571 aa8.62□□□□□ -1.03
APP-213ENST00000464867 IGKV1-8A0A0C4DH67 115 aa8.62□□□□□ -1.03
APP-213ENST00000464867 TMEM238LA0A1B0GVL6 79 aa8.62□□□□□ -1.03
APP-213ENST00000464867 SERINC4A6NH21 518 aa8.62□□□□□ -1.03
APP-213ENST00000464867 CD8B2A6NJW9 211 aa8.62□□□□□ -1.03
APP-213ENST00000464867 LRRC53A6NM62 1247 aa8.62□□□□□ -1.03
APP-213ENST00000464867 HAT1O14929 419 aa8.62□□□□□ -1.03
APP-213ENST00000464867 KPNA5O15131 536 aa8.62□□□□□ -1.03
APP-213ENST00000464867 AVILO75366 819 aa8.62□□□□□ -1.03
APP-213ENST00000464867 MYO1DO94832 1006 aa8.62□□□□□ -1.03
APP-213ENST00000464867 CYP1A2P05177 515 aa8.62□□□□□ -1.03
APP-213ENST00000464867 CPOXP36551 454 aa8.62□□□□□ -1.03
APP-213ENST00000464867 HSD17B2P37059 387 aa8.62□□□□□ -1.03
APP-213ENST00000464867 SOX3P41225 446 aa8.62□□□□□ -1.03
APP-213ENST00000464867 RPS15AP62244 130 aaKnown RBP8.62□□□□□ -1.03
APP-213ENST00000464867 TFDP2Q14188 446 aa8.62□□□□□ -1.03
APP-213ENST00000464867 RCAN2Q14206 197 aa8.62□□□□□ -1.03
APP-213ENST00000464867 HERC3Q15034 1050 aa8.62□□□□□ -1.03
APP-213ENST00000464867 CCSMST1Q4G0I0 132 aa8.62□□□□□ -1.03
APP-213ENST00000464867 ANKRD20A4Q4UJ75 823 aa8.62□□□□□ -1.03
APP-213ENST00000464867 ANKRD20A2Q5SQ80 823 aa8.62□□□□□ -1.03
APP-213ENST00000464867 THEMIS2Q5TEJ8 643 aa8.62□□□□□ -1.03
APP-213ENST00000464867 ANKRD20A1Q5TYW2 823 aa8.62□□□□□ -1.03
APP-213ENST00000464867 ANKRD20A3Q5VUR7 823 aa8.62□□□□□ -1.03
APP-213ENST00000464867 NIPAL1Q6NVV3 410 aa8.62□□□□□ -1.03
APP-213ENST00000464867 SEZ6L2Q6UXD5 910 aa8.62□□□□□ -1.03
APP-213ENST00000464867 QSOX2Q6ZRP7 698 aa8.62□□□□□ -1.03
APP-213ENST00000464867 PLD3Q8IV08 490 aa8.62□□□□□ -1.03
APP-213ENST00000464867 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
APP-213ENST00000464867 APCDD1LQ8NCL9 501 aa8.62□□□□□ -1.03
APP-213ENST00000464867 FBXO15Q8NCQ5 510 aaPredicted RBP8.62□□□□□ -1.03
APP-213ENST00000464867 STYXQ8WUJ0 223 aa8.62□□□□□ -1.03
APP-213ENST00000464867 P3H4Q92791 437 aa8.62□□□□□ -1.03
APP-213ENST00000464867 WDR89Q96FK6 387 aaPredicted RBP8.62□□□□□ -1.03
APP-213ENST00000464867 WFIKKN1Q96NZ8 548 aa8.62□□□□□ -1.03
APP-213ENST00000464867 QRFPRQ96P65 431 aa8.62□□□□□ -1.03
APP-213ENST00000464867 PPP1R2P1Q96PQ5 205 aa8.62□□□□□ -1.03
APP-213ENST00000464867 WDR83Q9BRX9 315 aaKnown RBP8.62□□□□□ -1.03
APP-213ENST00000464867 AARSD1Q9BTE6 412 aaKnown RBP8.62□□□□□ -1.03
APP-213ENST00000464867 SFXN3Q9BWM7 321 aa8.62□□□□□ -1.03
APP-213ENST00000464867 FAM129AQ9BZQ8 928 aa8.62□□□□□ -1.03
APP-213ENST00000464867 GBA3Q9H227 469 aa8.62□□□□□ -1.03
APP-213ENST00000464867 SLC6A15Q9H2J7 730 aa8.62□□□□□ -1.03
APP-213ENST00000464867 PIGMQ9H3S5 423 aa8.62□□□□□ -1.03
APP-213ENST00000464867 ABCF3Q9NUQ8 709 aa8.62□□□□□ -1.03
APP-213ENST00000464867 QPCTLQ9NXS2 382 aa8.62□□□□□ -1.03
APP-213ENST00000464867 KLHL28Q9NXS3 571 aa8.62□□□□□ -1.03
APP-213ENST00000464867 MYOTQ9UBF9 498 aa8.62□□□□□ -1.03
APP-213ENST00000464867 CAMK2AQ9UQM7 478 aa8.62□□□□□ -1.03
APP-213ENST00000464867 KCNE1BA0A087WTH5 132 aa8.61□□□□□ -1.03
APP-213ENST00000464867 MBD3L3A6NE82 208 aaPredicted RBP8.61□□□□□ -1.03
APP-213ENST00000464867 ZNF860A6NHJ4 632 aa8.61□□□□□ -1.03
APP-213ENST00000464867 H7BY64 318 aa8.61□□□□□ -1.03
APP-213ENST00000464867 PSMD12O00232 456 aaPredicted RBP8.61□□□□□ -1.03
APP-213ENST00000464867 PAX4O43316 350 aa8.61□□□□□ -1.03
APP-213ENST00000464867 OR1I1O60431 355 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms