RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 MEMO1Q9Y316 297 aa12.9□□□□□ -0.34
RPP40-203ENST00000464646 ANGPTL3Q9Y5C1 460 aa12.9□□□□□ -0.34
RPP40-203ENST00000464646 IGKV3D-11A0A0A0MRZ8 115 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 A0A1B0GTH9 108 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 WWP2O00308 870 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 CLDN14O95500 239 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 GSTM2P28161 218 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 PTGER1P34995 402 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 LIM2P55344 173 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 HSD17B7P56937 341 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 RAB10P61026 200 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 ID2Q02363 134 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 OR4D1Q15615 310 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 ZNF630Q2M218 657 aaPredicted RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 C16orf47Q6ZP98 133 aaPredicted RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 TICAM1Q8IUC6 712 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 CA5BP1Q8WTZ4 195 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 MTFMTQ96DP5 389 aaKnown RBP12.89□□□□□ -0.35
RPP40-203ENST00000464646 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 CSF3RQ99062 836 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 EFCAB11Q9BUY7 163 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 OR8D2Q9GZM6 311 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 WHRNQ9P202 907 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 ITGB1BP2Q9UKP3 347 aa12.89□□□□□ -0.35
RPP40-203ENST00000464646 TCRBV9S1A1TA0A576 114 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 SAP18O00422 153 aaKnown RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 RTCAO00442 366 aaKnown RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPP40-203ENST00000464646 LDB3O75112 727 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 FAM155BO75949 473 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 TGFB1P01137 390 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 TFEBP19484 476 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 CPN2P22792 545 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 PTGS2P35354 604 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 GMPRP36959 345 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 SSR2P43308 183 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 AP5B1Q2VPB7 878 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 ABHD17CQ6PCB6 329 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 CMC1Q7Z7K0 106 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 STAG3L4Q8TBR4 150 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 DAZLQ92904 295 aaKnown RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 GPR22Q99680 433 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 PHACTR1Q9C0D0 580 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 ROGDIQ9GZN7 287 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 PITHD1Q9GZP4 211 aaPredicted RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 OPTCQ9UBM4 332 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 DAPP1Q9UN19 280 aa12.88□□□□□ -0.35
RPP40-203ENST00000464646 YARS2Q9Y2Z4 477 aaKnown RBP12.88□□□□□ -0.35
RPP40-203ENST00000464646 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 C17orf105B2RV13 164 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 G3V3Y1 287 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 UBXN8O00124 270 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 ACOT7O00154 380 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 CDK2AP1O14519 115 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 PRKNO60260 465 aaPredicted RBP12.87□□□□□ -0.35
RPP40-203ENST00000464646 OR2J2O76002 312 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 TUBB4AP04350 444 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 TRHRP34981 398 aaPredicted RBP12.87□□□□□ -0.35
RPP40-203ENST00000464646 KCNC1P48547 511 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPP40-203ENST00000464646 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
RPP40-203ENST00000464646 KBTBD12Q3ZCT8 623 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 PAOXQ6QHF9 649 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 HSDL2Q6YN16 418 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 Q6ZPB1 254 aaPredicted RBP12.87□□□□□ -0.35
RPP40-203ENST00000464646 CHSY3Q70JA7 882 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 LRRC70Q7Z2Q7 622 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 MDGA2Q7Z553 956 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 SIAH3Q8IW03 269 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 SCUBE1Q8IWY4 988 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 UBE2E3Q969T4 207 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 KIAA1191Q96A73 305 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 CENPKQ9BS16 269 aa12.87□□□□□ -0.35
RPP40-203ENST00000464646 CD244Q9BZW8 370 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms