RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KCNA7Q96RP8 456 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 TRMOQ9BU70 441 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 AHSPQ9NZD4 102 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 KCMF1Q9P0J7 381 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 TIMM22Q9Y584 194 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 NSG1A0A0A6YYJ2 146 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 A0A1W2PQ72 361 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 A6NL46 340 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 MASP2O00187 686 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 CYR61O00622 381 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 CLDN4O14493 209 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 NPHS1O60500 1241 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 CRCPO75575 148 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZWINTO95229 277 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 HPP00738 406 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 COX6A1P12074 109 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 HSD3B1P14060 373 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 HSD3B2P26439 372 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 BSGP35613 385 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 FOXA1P55317 472 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 EEF1A2Q05639 463 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF33BQ06732 778 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 LANCL3Q6ZV70 420 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 HDXQ7Z353 690 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 CPEB2Q7Z5Q1 589 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ANKRD37Q7Z713 158 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 NUDCD3Q8IVD9 361 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF595Q8IYB9 648 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 FAM47BQ8NA70 645 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 TSLPQ969D9 159 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ABHD17AQ96GS6 310 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 HBEGFQ99075 208 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF717Q9BY31 904 aaPredicted RBP13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 SHCBP1LQ9BZQ2 653 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF700Q9H0M5 742 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 DDX31Q9H8H2 851 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF160Q9HCG1 818 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 PRDM9Q9NQV7 894 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 VPS29Q9UBQ0 182 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 FBXW2Q9UKT8 454 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 MRPS33Q9Y291 106 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 MMACHCQ9Y4U1 282 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 ATRXP46100 2492 aa13.65□□□□□ -0.22
SQSTM1-205ENST00000464493 BOD1L1Q8NFC6 3051 aa13.65□□□□□ -0.23
SQSTM1-205ENST00000464493 EEDO75530 441 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CEACAM4O75871 244 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CPN2P22792 545 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 SERPINB4P48594 390 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 HSD17B7P56937 341 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 SOX8P57073 446 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 MPP2Q14168 576 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 PCOLCEQ15113 449 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 SOWAHCQ53LP3 525 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 PAGE2Q7Z2X7 111 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CUZD1Q86UP6 607 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 GPR180Q86V85 440 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 NUDT13Q86X67 352 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 PARP9Q8IXQ6 854 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 METTL4Q8N3J2 472 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 GALNT16Q8N428 558 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 GBP7Q8N8V2 638 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 CSF3RQ99062 836 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 SLC25A23Q9BV35 468 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 MRPL1Q9BYD6 325 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 EML4Q9HC35 981 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 PRTFDC1Q9NRG1 225 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 MS4A12Q9NXJ0 267 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 ADAM29Q9UKF5 820 aa13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-205ENST00000464493 A0A0A6YYD5 115 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 IGHV3-20A0A0C4DH32 117 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SERTM1A2A2V5 107 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 WDR91A4D1P6 747 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 BIRC5O15392 142 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 TMPRSS11DO60235 418 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 CTNSO60931 367 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 KLK1P06870 262 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 FAM58BPP0C7Q3 252 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 DHRS4L1P0CG22 281 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 UROSP10746 265 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 ICAM2P13598 275 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 MAOAP21397 527 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 ITGA3P26006 1051 aa13.63□□□□□ -0.23
SQSTM1-205ENST00000464493 SERPINB3P29508 390 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms