RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZCCHC3Q9NUD5 404 aaKnown RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 AKAP7Q9P0M2 348 aaPredicted RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 ZNF319Q9P2F9 582 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 TEKT2Q9UIF3 430 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 PSORS1C1Q9UIG5 152 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 APPL1Q9UKG1 709 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 EXOC7Q9UPT5 735 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 TDRKHQ9Y2W6 561 aaKnown RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 WIPI2Q9Y4P8 454 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 ZHX2Q9Y6X8 837 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 SPAG9O60271 1321 aaKnown RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 LOC105371242A0A075B767 164 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 ATP6AP2A0A1C7CYW4 349 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 SYCE3A1L190 88 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 SLC15A5A6NIM6 579 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 MPTX1A8MV57 137 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 SIGLEC5O15389 551 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 ZBTB14O43829 449 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 VEGFDO43915 354 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 ECE2O60344 883 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 LRCH4O75427 683 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 FGF19O95750 216 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 RPLP0P05388 317 aaKnown RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 MMP10P09238 476 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 EDNRAP25101 427 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 STIP1P31948 543 aaKnown RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 CCR4P51679 360 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 ERVK-16P61578 105 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 GFPT1Q06210 699 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 TSTA3Q13630 321 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 FAM189A2Q15884 450 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 C3AR1Q16581 482 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 B3GLCTQ6Y288 498 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 KIF6Q6ZMV9 814 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 LRRTM1Q86UE6 522 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 MYPOPQ86VE0 399 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 NLRP14Q86W24 1093 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 ZNF440Q8IYI8 595 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 DND1Q8IYX4 353 aaKnown RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 FBXW8Q8N3Y1 598 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 GPATCH11Q8N954 259 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 MAPK1IP1LQ8NDC0 245 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 TRPV3Q8NET8 790 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 OR10G7Q8NGN6 311 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 OR5M9Q8NGP3 310 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 PRCCQ92733 491 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 PRAM1Q96QH2 718 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 RBM4BQ9BQ04 359 aaKnown RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 FNDC4Q9H6D8 234 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 ZNF665Q9H7R5 613 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 S100A14Q9HCY8 104 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 PRMT8Q9NR22 394 aaPredicted RBP3.48□□□□□ -1.85
CLK1-208ENST00000464454 PLEK2Q9NYT0 353 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 NLGN3Q9NZ94 848 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 KLK11Q9UBX7 282 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 BAIAP2L1Q9UHR4 511 aa3.48□□□□□ -1.85
CLK1-208ENST00000464454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 CCSO14618 274 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 TLX2O43763 284 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 GMNNO75496 209 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 DUS4LO95620 317 aaKnown RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 CPNE6O95741 557 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 TBX6O95947 436 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 CHRNGP07510 517 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 NUDT17P0C025 328 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 PDHA2P29803 388 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 TMEM50BP56557 158 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 GSCP56915 257 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 KCNK10P57789 538 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 GK2Q14410 553 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 STX1AQ16623 288 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 FASTKD1Q53R41 847 aaKnown RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 LCLAT1Q6UWP7 414 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 C3P1Q6ZMU1 363 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 RABEPKQ7Z6M1 372 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 STHQ8IWL8 128 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 OR9Q2Q8NGE9 314 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 C8orf46Q8TAG6 207 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 UBTD2Q8WUN7 234 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 CNRIP1Q96F85 164 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 ZNF560Q96MR9 790 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 SSX3Q99909 188 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 NTMT1Q9BV86 223 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 UBXN6Q9BZV1 441 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 TMEM245Q9H330 911 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 UBE2TQ9NPD8 197 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 TEX10Q9NXF1 929 aaPredicted RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 GPRASP1Q5JY77 1395 aa3.47□□□□□ -1.85
CLK1-208ENST00000464454 DHX29Q7Z478 1369 aaKnown RBP3.47□□□□□ -1.85
CLK1-208ENST00000464454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 TRBV2A0A0J9YWF9 115 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 K7EQD1 137 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 INPP4BO15327 924 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 TNFSF12O43508 249 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ATP6V1G1O75348 118 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ANGPTL1O95841 491 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 LYNP07948 512 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms