RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZNF10P21506 573 aaPredicted RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 JAK1P23458 1154 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 CERS1P27544 350 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 SERPINB1P30740 379 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 NEK2P51955 445 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 PKNOX1P55347 436 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 WDR4P57081 412 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 BTG2P78543 158 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 GALNT1Q10472 559 aaPredicted RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 TRAF3Q13114 568 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 PCOLCEQ15113 449 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 ZRSR2Q15696 482 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 HSP90B2PQ58FF3 399 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 HHATQ5VTY9 493 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 IRAK1BP1Q5VVH5 260 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 CPEB2Q7Z5Q1 589 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 ANKRD37Q7Z713 158 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 ANKRD42Q8N9B4 389 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 PLPP5Q8NEB5 264 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 TRPC4APQ8TEL6 797 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 REPS1Q96D71 796 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 MTFMTQ96DP5 389 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 CMTM7Q96FZ5 175 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 SERINC2Q96SA4 455 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 SMAD5Q99717 465 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 ZNF700Q9H0M5 742 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 COPS7BQ9H9Q2 264 aaPredicted RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 DMRT3Q9NQL9 472 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 PRDM7Q9NQW5 492 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 C19orf25Q9UFG5 118 aaPredicted RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 ADGRE2Q9UHX3 823 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 A0A1B0GTL3 188 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 MAGEB17A8MXT2 336 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 SUV39H1O43463 412 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 PRMT3O60678 531 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 CELA2AP08217 269 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 CYC1P08574 325 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 PIK3CBP42338 1070 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 MTTPP55157 894 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 RPS13P62277 151 aaKnown RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 PPP2R2AP63151 447 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 ACTN3Q08043 901 aaPredicted RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 KLRB1Q12918 225 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 TMEM35AQ53FP2 167 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 C10orf62Q5T681 223 aaPredicted RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 VWA5B1Q5TIE3 1220 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 KHDRBS2Q5VWX1 349 aaKnown RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 HOMEZQ8IX15 550 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 KBTBD2Q8IY47 623 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 SRFBP1Q8NEF9 429 aaKnown RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 OR4F6Q8NGB9 312 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 PTCHD1Q96NR3 888 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 KCNC2Q96PR1 638 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 SORBS1Q9BX66 1292 aaKnown RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 NPLQ9BXD5 320 aaPredicted RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 MFRPQ9BY79 579 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 LHPPQ9H008 270 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 ZBTB20Q9HC78 741 aaPredicted RBP16.02■□□□□ 0.16
VPS52-215ENST00000464425 RIC8BQ9NVN3 520 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 TRPS1Q9UHF7 1281 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 ZNF225Q9UK10 706 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 PCDHGB7Q9Y5F8 929 aa16.02■□□□□ 0.16
VPS52-215ENST00000464425 A0A1W2PQ72 361 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 UBFD1O14562 309 aaKnown RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 SNUPNO95149 360 aaKnown RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 ESRRBO95718 433 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 ALPPP05187 535 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 MAOAP21397 527 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 GRK2P25098 689 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 ATP5A1P25705 553 aaKnown RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 LIM2P55344 173 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 PHEXP78562 749 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 AP5B1Q2VPB7 878 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 NADK2Q4G0N4 442 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 SFT2D3Q587I9 215 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 SGO1Q5FBB7 561 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 DEPDC1Q5TB30 811 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 FAM219BQ5XKK7 198 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 TTC19Q6DKK2 380 aaPredicted RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 ZNF793Q6ZN11 406 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 GPRIN3Q6ZVF9 776 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 FAM47BQ8NA70 645 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 AGAP11Q8TF27 550 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 TBCDQ9BTW9 1192 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 EML4Q9HC35 981 aaKnown RBP16.01■□□□□ 0.15
VPS52-215ENST00000464425 PSD3Q9NYI0 1048 aa16.01■□□□□ 0.15
VPS52-215ENST00000464425 DOCK10Q96BY6 2186 aa16■□□□□ 0.15
VPS52-215ENST00000464425 KLHL41O60662 606 aa16■□□□□ 0.15
VPS52-215ENST00000464425 SERPINE1P05121 402 aa16■□□□□ 0.15
VPS52-215ENST00000464425 SERPINA7P05543 415 aa16■□□□□ 0.15
VPS52-215ENST00000464425 ENO1P06733 434 aaKnown RBP16■□□□□ 0.15
VPS52-215ENST00000464425 PRR35P0CG20 571 aa16■□□□□ 0.15
VPS52-215ENST00000464425 PTX3P26022 381 aaPredicted RBP16■□□□□ 0.15
VPS52-215ENST00000464425 SSR2P43308 183 aa16■□□□□ 0.15
VPS52-215ENST00000464425 RAP1GDS1P52306 607 aa16■□□□□ 0.15
VPS52-215ENST00000464425 RAB38P57729 211 aa16■□□□□ 0.15
VPS52-215ENST00000464425 OR4D2P58180 307 aa16■□□□□ 0.15
VPS52-215ENST00000464425 RCN2Q14257 317 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms