RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
RTCB-202ENST00000463455 NECTIN3Q9NQS3 549 aa11.13□□□□□ -0.63
RTCB-202ENST00000463455 PRTFDC1Q9NRG1 225 aa11.13□□□□□ -0.63
RTCB-202ENST00000463455 IGSF5Q9NSI5 407 aa11.13□□□□□ -0.63
RTCB-202ENST00000463455 ZNF490Q9ULM2 529 aaPredicted RBP11.13□□□□□ -0.63
RTCB-202ENST00000463455 DAPP1Q9UN19 280 aa11.13□□□□□ -0.63
RTCB-202ENST00000463455 UTP20O75691 2785 aaKnown RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 SUPT3HB4E1H0 165 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CYR61O00622 381 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SUPT3HO75486 399 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 FAM155BO75949 473 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 NEURL1O76050 574 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 F10P00742 488 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 MTHFD2P13995 350 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 EPB42P16452 691 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 EPORP19235 508 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CD22P20273 847 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 PIK3CBP42338 1070 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CYB561P49447 251 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SERPINB8P50452 374 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 PLA2G16P53816 162 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 DLG1Q12959 904 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 BIKQ13323 160 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 RUNX2Q13950 521 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SERTAD2Q14140 314 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 NAA30Q147X3 362 aaPredicted RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 TRADDQ15628 312 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 GRHL2Q6ISB3 625 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SLC25A25Q6KCM7 469 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 MED27Q6P2C8 311 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CHSY3Q70JA7 882 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 GPALPP1Q8IXQ4 340 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CENPLQ8N0S6 344 aaPredicted RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SLC34A3Q8N130 599 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 TMEM132CQ8N3T6 1108 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 MMGT1Q8N4V1 131 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 POGLUT1Q8NBL1 392 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 ZNF473Q8WTR7 871 aaKnown RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 TMEM125Q96AQ2 219 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SIGLEC12Q96PQ1 595 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 LRRC1Q9BTT6 524 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 MS4A8Q9BY19 250 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CDCP1Q9H5V8 836 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 LRFN1Q9P244 771 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 SEC14L3Q9UDX4 400 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 TNPO3Q9Y5L0 923 aaKnown RBP11.12□□□□□ -0.63
RTCB-202ENST00000463455 SPACA6W5XKT8 324 aa11.12□□□□□ -0.63
RTCB-202ENST00000463455 ESYT3A0FGR9 886 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 FAM227AF5H4B4 570 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 KIF2AO00139 706 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 KLK8O60259 260 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 NME2P1O60361 137 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 CTNSO60931 367 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SLC25A12O75746 678 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 URI1O94763 535 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 KLHL2O95198 593 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 CLDN1O95832 211 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 C2P06681 752 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SP1P08047 785 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 NME2P22392 152 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 MST1P26927 711 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 TPP2P29144 1249 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 MSH2P43246 934 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 HLCSP50747 726 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 ALDH18A1P54886 795 aaKnown RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 LIM2P55344 173 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SLC7A5Q01650 507 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 OC90Q02509 493 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 PCBP2Q15366 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTCB-202ENST00000463455 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 C10orf62Q5T681 223 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 LIPJQ5W064 366 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SPINK14Q6IE38 97 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 KIF2BQ8N4N8 673 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 DAZLQ92904 295 aaKnown RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 EXT2Q93063 718 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 ISL2Q96A47 359 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 ESAMQ96AP7 390 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 NXNL1Q96CM4 212 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 REPS1Q96D71 796 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 CMTM7Q96FZ5 175 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
RTCB-202ENST00000463455 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 CCDC77Q9BR77 488 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 PRDM7Q9NQW5 492 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 SNX15Q9NRS6 342 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
RTCB-202ENST00000463455 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms