RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ROGDIQ9GZN7 287 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 ACTR8Q9H981 624 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 XPR1Q9UBH6 696 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 DAPP1Q9UN19 280 aa9.52□□□□□ -0.89
SF3A3-204ENST00000462258 CROCCQ5TZA2 2017 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 A0A087WUV0 522 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TRBV11-1A0A0K0K1C0 115 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 A1L4Q6 167 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 SYNDIG1LA6NDD5 238 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 LRRC14BA6NHZ5 514 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 POC1B-GALNT4F8VUJ3 575 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 RTCAO00442 366 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CLDN4O14493 209 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 KLK8O60259 260 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 SH3BGRLO75368 114 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 KRT38O76015 456 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 SCELO95171 688 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 LDLRP01130 860 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CRYABP02511 175 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 HIST1H1TP22492 207 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CNTFP26441 200 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TPP2P29144 1249 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PPP2R1BP30154 601 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PIK3CGP48736 1102 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 OC90Q02509 493 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 GTF2H2Q13888 395 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PCBP2Q15366 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TMEM35AQ53FP2 167 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 KHDRBS2Q5VWX1 349 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF324BQ6AW86 544 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 GTF2H2CQ6P1K8 395 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 RPS19BP1Q86WX3 136 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 RNF175Q8N4F7 328 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PTGR2Q8N8N7 351 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TMEM178AQ8NBL3 297 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 NFAM1Q8NET5 270 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 OR7G3Q8NG95 312 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 UHMK1Q8TAS1 419 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CMTM7Q96FZ5 175 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 VMP1Q96GC9 406 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 SCMH1Q96GD3 660 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 GPR78Q96P69 363 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 TBCDQ9BTW9 1192 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 HES7Q9BYE0 225 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CDCP1Q9H5V8 836 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 LYRM4Q9HD34 91 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 ADAP2Q9NPF8 381 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 DMRT3Q9NQL9 472 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PRDM7Q9NQW5 492 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PNO1Q9NRX1 252 aaKnown RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF358Q9NW07 568 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 PLEKHB1Q9UF11 243 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF180Q9UJW8 692 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 SPACA6W5XKT8 324 aa9.51□□□□□ -0.89
SF3A3-204ENST00000462258 EXOC1LA0A1B0GW35 172 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 TRIM49D1C9J1S8 452 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 SAP18O00422 153 aaKnown RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CYR61O00622 381 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 UGDHO60701 494 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 NEURL1O76050 574 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 SIX3O95343 332 aaPredicted RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 TGFB1P01137 390 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 ABHD2P08910 425 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CD46P15529 392 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 ATP5A1P25705 553 aaKnown RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 EEF1DP29692 281 aaKnown RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CD96P40200 585 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 ARL1P40616 181 aaPredicted RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CLCN2P51788 898 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 RAP1GDS1P52306 607 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 KCNK10P57789 538 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 MLF1P58340 268 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 PHEXP78562 749 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 ELAVL1Q15717 326 aaKnown RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 TSNAXIP1Q2TAA8 658 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 C4orf17Q53FE4 359 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 LIPJQ5W064 366 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 SPINK14Q6IE38 97 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 GOLGA7Q7Z5G4 137 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 UBE3DQ7Z6J8 389 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 HORMAD2Q8N7B1 307 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 ACOT4Q8N9L9 421 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 APCDD1LQ8NCL9 501 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 DNAJB8Q8NHS0 232 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 HUS1BQ8NHY5 278 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 DCAKDQ8WVC6 231 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 NCLNQ969V3 563 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 REPS1Q96D71 796 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 SCYL1Q96KG9 808 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 MAPKAP1Q9BPZ7 522 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 CENPKQ9BS16 269 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 DEFB126Q9BYW3 111 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 OR51B5Q9H339 312 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 KLHL1Q9NR64 748 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 LRFN1Q9P244 771 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms