RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 GABRA1P14867 456 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 TPSB2P20231 275 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HIST1H2ADP20671 130 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 SAT1P21673 171 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 KCNJ1P48048 391 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 RGS4P49798 205 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 ASCL1P50553 236 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HK2P52789 917 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 WNT3P56703 355 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 DCAF7P61962 342 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 BTN3A2P78410 334 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 SLC13A2Q13183 592 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 SP140Q13342 867 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 CSHL1Q14406 222 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 RBBP5Q15291 538 aaKnown RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 PCBP2Q15366 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 TPSAB1Q15661 275 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HSPB2Q16082 182 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 MYO1HQ8N1T3 1032 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 FAM47BQ8NA70 645 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 NAXEQ8NCW5 288 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 TMEM52Q8NDY8 209 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 RNASE6Q93091 150 aaKnown RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 NEIL2Q969S2 332 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 LRRC46Q96FV0 321 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HIST1H2AHQ96KK5 128 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 HIST1H2AJQ99878 128 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 H2AFJQ9BTM1 129 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 AICDAQ9GZX7 198 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 CLK4Q9HAZ1 481 aaKnown RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 SACM1LQ9NTJ5 587 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 PPIEQ9UNP9 301 aaKnown RBP12.72□□□□□ -0.37
PABPC4-208ENST00000461578 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
PABPC4-208ENST00000461578 NCKAP5O14513 1909 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 PABPN1LA6NDY0 278 aaKnown RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 KDM4EB2RXH2 506 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 EIF3FO00303 357 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 DVL2O14641 736 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 GUCA1CO95843 209 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 IFNA16P05015 189 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 SMIM10L1P0DMW3 83 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 AHRP35869 848 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 PIGAP37287 484 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 VPS41P49754 854 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 CCZ1BP86790 482 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 CCZ1P86791 482 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 REEP5Q00765 189 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 FOXO1Q12778 655 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 KIF5AQ12840 1032 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 RUNX2Q13950 521 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 POU4F3Q15319 338 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 DUPD1Q68J44 220 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 LRRC8EQ6NSJ5 796 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 PAQR3Q6TCH7 311 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 C4orf22Q6V702 233 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 STRA8Q7Z7C7 330 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 TNIP2Q8NFZ5 429 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 OR56A3Q8NH54 315 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 LINC01560Q8TB33 94 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 SLC5A11Q8WWX8 675 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 KIAA1191Q96A73 305 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 LINGO1Q96FE5 620 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 SMIM10Q96HG1 83 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 PLEKHF2Q9H8W4 249 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 ADAP2Q9NPF8 381 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 C20orf96Q9NUD7 363 aaPredicted RBP12.71□□□□□ -0.37
PABPC4-208ENST00000461578 FBXO5Q9UKT4 447 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 COMMD10Q9Y6G5 202 aa12.71□□□□□ -0.37
PABPC4-208ENST00000461578 ZCWPW2A0A1B0GU75 182 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 CLDN4O14493 209 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 HCN1O60741 890 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 CDK16Q00536 496 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 TIAL1Q01085 375 aaKnown RBP eCLIP12.7□□□□□ -0.38
PABPC4-208ENST00000461578 CCNG2Q16589 344 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 ANKRD22Q5VYY1 191 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 UGT3A1Q6NUS8 523 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 TMPRSS11BQ86T26 416 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
PABPC4-208ENST00000461578 ULK2Q8IYT8 1036 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 GOLM1Q8NBJ4 401 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 TRPV3Q8NET8 790 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 FAR2Q96K12 515 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 OR8D2Q9GZM6 311 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
PABPC4-208ENST00000461578 ATG4BQ9Y4P1 393 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms