RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 ABHD17BQ5VST6 288 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 RPS27LQ71UM5 84 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 SCUBE1Q8IWY4 988 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 ZNF595Q8IYB9 648 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 CISD2Q8N5K1 135 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 ACOT4Q8N9L9 421 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 CDK15Q96Q40 435 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 CENPKQ9BS16 269 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 MMP25Q9NPA2 562 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 PLA2G3Q9NZ20 509 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 KCMF1Q9P0J7 381 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 PCDHGA10Q9Y5H3 936 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 ESPL1Q14674 2120 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SAGE2PA6NJ88 616 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 A8MUA0 341 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 TGFBR3LH3BV60 316 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 CLDN4O14493 209 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 VPS4BO75351 444 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 TAC1P20366 129 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 HSD17B7P56937 341 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 ZNF33BQ06732 778 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SLC13A2Q13183 592 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 ZNF169Q14929 603 aaPredicted RBP13.36□□□□□ -0.27
THBS3-204ENST00000460050 TLR1Q15399 786 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 OR4C11Q6IEV9 310 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 H3F3CQ6NXT2 135 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 TDRPQ86YL5 185 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 WDR20Q8TBZ3 569 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 ZNF483Q8TF39 744 aaPredicted RBP13.36□□□□□ -0.27
THBS3-204ENST00000460050 RGMAQ96B86 450 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SNRNP40Q96DI7 357 aaKnown RBP13.36□□□□□ -0.27
THBS3-204ENST00000460050 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
THBS3-204ENST00000460050 C1QTNF3Q9BXJ4 246 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 PPCSQ9HAB8 311 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 LYRM4Q9HD34 91 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
THBS3-204ENST00000460050 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 CLDN16Q9Y5I7 305 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 SVILO95425 2214 aa13.36□□□□□ -0.27
THBS3-204ENST00000460050 USP9XQ93008 2570 aaPredicted RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 A0A1W2PPM1 405 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 FOXO6A8MYZ6 492 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 PLPP1O14494 284 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 WDPCPO95876 746 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 F10P00742 488 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 GSTA1P08263 222 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 TSPAN8P19075 237 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 PTX3P26022 381 aaPredicted RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 HSD17B3P37058 310 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 TSFMP43897 325 aaKnown RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 TNFSF10P50591 281 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 NEK2P51955 445 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 CDH13P55290 713 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 TAS2R50P59544 299 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 HERVK_113P63132 956 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 CLNKQ7Z7G1 428 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 CRLF3Q8IUI8 442 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 GALNT11Q8NCW6 608 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 OR4F6Q8NGB9 312 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 OR1N1Q8NGS0 311 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 HAS2Q92819 552 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 ERVK-6Q9BXR3 956 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 PNO1Q9NRX1 252 aaKnown RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 ASF1BQ9NVP2 202 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 STMN3Q9NZ72 180 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 NTNG1Q9Y2I2 539 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
THBS3-204ENST00000460050 SPACA6W5XKT8 324 aa13.35□□□□□ -0.27
THBS3-204ENST00000460050 PTPN13Q12923 2485 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 A0A1B0GTL3 188 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 OR5H15A6NDH6 313 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 ESPNB1AK53 854 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 FOXE1O00358 373 aaPredicted RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 PPP6CO00743 305 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 DLX3O60479 287 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 GLRA3O75311 464 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 MYO1DO94832 1006 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 ETHE1O95571 254 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 OTCP00480 354 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 KRT15P19012 456 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 UQCRFS1P47985 274 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 SLAMF1Q13291 335 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 CUL3Q13618 768 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms