RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 UFD1Q92890 307 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 GLYATL1Q969I3 302 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC35B4Q969S0 331 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 GTPBP3Q969Y2 492 aaKnown RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 KIAA1143Q96AT1 154 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 AP2M1Q96CW1 435 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 WDR34Q96EX3 536 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCDC97Q96F63 343 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 OTUB1Q96FW1 271 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 LRIG1Q96JA1 1093 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF514Q96K75 400 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC35G5Q96KT7 338 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CAMK1GQ96NX5 476 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 WDFY2Q96P53 400 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC38A2Q96QD8 506 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 PKP4Q99569 1192 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 KCNS3Q9BQ31 491 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CLSTN3Q9BQT9 956 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CNPPD1Q9BV87 410 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 FNDC11Q9BVV2 318 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CDADC1Q9BWV3 514 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 BTBD2Q9BX70 525 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 ASPNQ9BXN1 380 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 PITHD1Q9GZP4 211 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 HOXD1Q9GZZ0 328 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCBD2Q9H0N5 130 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 POLR2J3Q9H1A7 115 aaKnown RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR51E2Q9H255 320 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 EPHX3Q9H6B9 360 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLA2Q9H6Q3 261 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 NMNAT1Q9HAN9 279 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 PELI2Q9HAT8 420 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 RC3H2Q9HBD1 1191 aaKnown RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 NEK6Q9HC98 313 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 AMBNQ9NP70 447 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 A4GALTQ9NPC4 353 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 KRCC1Q9NPI7 259 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 C11orf16Q9NQ32 467 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 DMRT3Q9NQL9 472 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 DIABLOQ9NR28 239 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 ASAH2Q9NR71 780 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SEMA3GQ9NS98 782 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SACM1LQ9NTJ5 587 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 P2RX2Q9UBL9 471 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 AASSQ9UDR5 926 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 CD84Q9UIB8 345 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 FBXO10Q9UK96 956 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC13A4Q9UKG4 626 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC9A8Q9Y2E8 581 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 EXOSC1Q9Y3B2 195 aaKnown RBP3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 MAP4K5Q9Y4K4 846 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SNX8Q9Y5X2 465 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 PLXNA4Q9HCM2 1894 aa3.19□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC5A10A0PJK1 596 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 TSPAN11A1L157 253 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 PIPSLA2A3N6 862 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 HYKKA2RU49 373 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 HMX3A6NHT5 357 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 ANKDD1BA6NHY2 528 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 NEDD8-MDP1E9PL57 170 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 LEFTY2O00292 366 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 GFRA2O00451 464 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 STK25O00506 426 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARHGAP33O14559 1287 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC9A3R1O14745 358 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC30A4O14863 429 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 DSCR3O14972 297 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 KMOO15229 486 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 CAPN5O15484 640 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 CHST10O43529 356 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 TSPAN6O43657 245 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC28A2O43868 658 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 HCN1O60741 890 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC19A2O60779 497 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 TBX19O60806 448 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 MMP20O60882 483 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMCC2O75069 709 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 GUCY1B2O75343 617 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 ENTPD6O75354 484 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SH3BGRLO75368 114 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 NME6O75414 186 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 MTX2O75431 263 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SEMA3DO95025 777 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 KCNK2O95069 426 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC16A8O95907 504 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 B3GALT4O96024 378 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 GNRH1P01148 92 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRNPP04156 253 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 BCHEP06276 602 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 IL3P08700 152 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 NUDT7P0C024 238 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRKAR1AP10644 381 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 ACADMP11310 421 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 POU2F1P14859 743 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF8P17098 575 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 GABRB1P18505 474 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 CD22P20273 847 aa3.18□□□□□ -1.9
HMGN1P18-201ENST00000457642 DDCP20711 480 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms